Linker Name | PDB ID | Linker Chain | Amino Acid Position | Amino Acid | Amino Acid Atom | Contact Distance | Interaction Type | Nucleotide Chain | Nucleotide Position | Nucleotide | Nucleotide Atom | Ligand Structurename | Ligand ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 4.96 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CB | 4.17 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 208 | ILE | CB | 4.89 Å | van-der-waals | P | 10 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 203 | PRO | N | 4.69 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | C | 4.39 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 3.66 Å | van-der-waals | P | 9 | U | C2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 208 | ILE | CG2 | 4.73 Å | van-der-waals | P | 10 | U | C5 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | N | 3.44 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 212 | ASN | CG | 3.99 Å | van-der-waals | P | 5 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | CB | 4.58 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | N | 3.38 Å | van-der-waals | P | 10 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | CA | 4 Å | van-der-waals | P | 10 | U | C2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 212 | ASN | OD1 | 4.33 Å | van-der-waals | P | 5 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 203 | PRO | O | 4.57 Å | van-der-waals | P | 10 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | O | 3.25 Å | van-der-waals | P | 10 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 212 | ASN | ND2 | 4.23 Å | van-der-waals | P | 5 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | C | 4 Å | van-der-waals | P | 10 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 203 | PRO | CA | 4.88 Å | van-der-waals | P | 10 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CA | 4.07 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | C | 4.72 Å | van-der-waals | P | 10 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH1 | 4.95 Å | van-der-waals | P | 10 | U | C5 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 212 | ASN | CG | 4.91 Å | van-der-waals | P | 5 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 199 | SER | OG | 4.88 Å | van-der-waals | P | 9 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CG | 4.5 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 208 | ILE | CG2 | 4.77 Å | van-der-waals | P | 10 | U | C6 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | C | 3.53 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 208 | ILE | CG2 | 4.2 Å | van-der-waals | P | 10 | U | OP2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | O | 3.35 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | N | 4.97 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH1 | 4.78 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 203 | PRO | C | 4.61 Å | van-der-waals | P | 10 | U | C2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 208 | ILE | CG2 | 4.73 Å | van-der-waals | P | 9 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 4.07 Å | van-der-waals | P | 9 | U | C2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | C | 4.45 Å | van-der-waals | P | 10 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | CB | 4.29 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 205 | GLY | N | 3.69 Å | hbond | P | 10 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 205 | GLY | CA | 4.9 Å | van-der-waals | P | 10 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 4.5 Å | van-der-waals | P | 9 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CZ | 3.79 Å | van-der-waals | P | 9 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | CB | 4.28 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | CA | 4.73 Å | van-der-waals | P | 10 | U | N1 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CZ | 4.01 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | CA | 4.47 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | O | 4.64 Å | van-der-waals | P | 10 | U | C5 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 3.76 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 203 | PRO | O | 4.65 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CZ | 4.24 Å | van-der-waals | P | 9 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | CA | 4.79 Å | van-der-waals | P | 10 | U | C1' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CZ | 3.66 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 2.88 Å | hbond | P | 9 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | O | 2.48 Å | hbond | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 4.17 Å | van-der-waals | P | 9 | U | C1' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 203 | PRO | C | 4.09 Å | van-der-waals | P | 10 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NE | 3.74 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CB | 3.93 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CA | 3.38 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 203 | PRO | O | 4.84 Å | van-der-waals | P | 10 | U | C2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CZ | 4.63 Å | van-der-waals | P | 9 | U | C2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 212 | ASN | OD1 | 4.64 Å | van-der-waals | P | 5 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | CA | 3.25 Å | van-der-waals | P | 10 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 200 | TYR | O | 4.58 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 4.22 Å | van-der-waals | P | 10 | U | C6 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | CB | 4.7 Å | van-der-waals | P | 11 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | N | 4.76 Å | van-der-waals | P | 10 | U | C2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 212 | ASN | OD1 | 4.93 Å | van-der-waals | P | 5 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | C | 4.43 Å | van-der-waals | P | 10 | U | C2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | N | 4.18 Å | van-der-waals | P | 10 | U | C2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 208 | ILE | O | 4.51 Å | van-der-waals | P | 10 | U | OP2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NE | 3.02 Å | hbond | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | CA | 4.61 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | N | 2.63 Å | hbond | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CD | 3.82 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | C | 3.62 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH1 | 4.79 Å | van-der-waals | P | 9 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 3.66 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NE | 4.84 Å | van-der-waals | P | 9 | U | C2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | O | 4.53 Å | van-der-waals | P | 10 | U | N1 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 3.26 Å | van-der-waals | P | 10 | U | C5 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 203 | PRO | C | 4.51 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CZ | 4.98 Å | van-der-waals | P | 10 | U | C6 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CB | 3.21 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | CA | 4.41 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | CA | 4.56 Å | van-der-waals | P | 10 | U | C2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | O | 3.42 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CD | 4.66 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NE | 4.12 Å | van-der-waals | P | 10 | U | C5 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 212 | ASN | ND2 | 2.86 Å | hbond | P | 5 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | C | 3.85 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 212 | ASN | ND2 | 3.86 Å | van-der-waals | P | 5 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 4.86 Å | ionic | P | 10 | U | OP2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CZ | 3.95 Å | van-der-waals | P | 10 | U | C5 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 2.96 Å | hbond | P | 9 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CA | 3.98 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NH2 | 4.25 Å | van-der-waals | P | 9 | U | N1 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | CA | 3.35 Å | van-der-waals | P | 10 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | CG | 3.5 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | N | 4.46 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | N | 3.47 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | CA | 3.72 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 212 | ASN | CG | 4.85 Å | van-der-waals | P | 5 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 204 | GLY | N | 4.6 Å | van-der-waals | P | 10 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | O | 4.78 Å | van-der-waals | P | 10 | U | O4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NE | 3.86 Å | van-der-waals | P | 9 | U | O2 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 201 | ALA | C | 4.33 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | C | 4.11 Å | van-der-waals | P | 10 | U | C4 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 205 | GLY | O | 4.4 Å | van-der-waals | P | 10 | U | O2' | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | N | 4.84 Å | van-der-waals | P | 10 | U | C5 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | NE | 4.81 Å | van-der-waals | P | 10 | U | N3 | 1B7FP00 | Lig3 |
P19339_linker1 | 1B7F | A | 202 | ARG | O | 3.25 Å | van-der-waals | P | 10 | U | C2 | 1B7FP00 | Lig3 |