Toggle column: Linker Name PDB ID Linker Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Chain Nucleotide Position Nucleotide Nucleotide Atom Ligand Structurename Ligand ID
Linker Name PDB ID Linker Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Chain Nucleotide Position Nucleotide Nucleotide Atom Ligand Structurename Ligand ID
P26368_linker1 3VAG B 228 ARG C 4.71 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 227 ARG CB 4.18 Å van-der-waals E 5 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 4.07 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 4.07 Å van-der-waals E 5 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CA 4.68 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CG 4.71 Å van-der-waals E 5 U C2' 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CA 4.16 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS N 4.74 Å van-der-waals E 6 U C5 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CB 3.36 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP OD2 4.03 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CG 3.87 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CA 3.93 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO C 3.76 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS NE2 3.86 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG O 3.83 Å van-der-waals E 5 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO C 4.24 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CA 3.39 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO N 4.47 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CG 4.97 Å van-der-waals E 5 U C1' 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 4.72 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 4.01 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CG 4.37 Å van-der-waals E 5 U N1 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 4.52 Å van-der-waals E 5 U C1' 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO C 3.66 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS N 4.98 Å van-der-waals E 5 U N1 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP CG 4.43 Å van-der-waals E 6 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS ND1 3.76 Å van-der-waals E 5 U C2' 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CG 3.91 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS ND1 4.36 Å van-der-waals E 5 U C6 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO N 4.63 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CB 4.73 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CG 4.91 Å van-der-waals E 5 U C6 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO C 4.36 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 260 LYS CE 4.64 Å van-der-waals P 4 U C4 3VAGP00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 3.93 Å van-der-waals E 5 U C5 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS ND1 4.15 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 260 LYS NZ 2.87 Å hbond P 4 U O4 3VAGP00 Lig113
P26368_linker1 3VAG B 260 LYS CE 4.78 Å van-der-waals P 4 U N3 3VAGP00 Lig113
P26368_linker1 3VAG B 230 HIS NE2 3.74 Å van-der-waals E 5 U C5 3VAGE00 Lig113
P26368_linker1 3VAG B 260 LYS CE 3.69 Å van-der-waals P 4 U O4 3VAGP00 Lig113
P26368_linker1 3VAG B 227 ARG CG 3.69 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS ND1 4.66 Å van-der-waals E 5 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 260 LYS NZ 3.85 Å van-der-waals P 4 U C4 3VAGP00 Lig113
P26368_linker1 3VAG B 229 PRO CB 4.21 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS 3.64 Å stack E 5 U 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS NE2 4.64 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP CB 3.99 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO C 4.67 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS ND1 4.25 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP OD1 3.82 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 227 ARG CD 4.55 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP N 4.44 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 227 ARG CB 4.72 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CD2 3.85 Å van-der-waals E 5 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS NE2 4.17 Å van-der-waals E 5 U N1 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG C 4.92 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CB 3.91 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CD2 3.55 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CG 3.97 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CD2 4.73 Å van-der-waals E 5 U C6 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 4.59 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CB 4.97 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS ND1 3.92 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 4.01 Å van-der-waals E 5 U C2' 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS N 3.9 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP C 4.93 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 260 LYS NZ 4.04 Å van-der-waals P 4 U N3 3VAGP00 Lig113
P26368_linker1 3VAG B 230 HIS CA 4.92 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CB 4.19 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG C 4.79 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP OD2 4.9 Å van-der-waals E 6 U C5 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS NE2 3.99 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CA 4.11 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS N 4.1 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO O 4.67 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG N 4.98 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS ND1 4.7 Å van-der-waals E 5 U C5 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CB 4.45 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 3.82 Å van-der-waals E 5 U C6 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS N 3.2 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG O 4.07 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CE1 3.86 Å van-der-waals E 5 U N1 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP OD2 4.33 Å van-der-waals E 6 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG C 4.99 Å van-der-waals E 5 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CD2 3.91 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CA 4.12 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP CG 3.23 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO O 4.84 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG O 3.61 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG O 4.05 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS NE2 4.98 Å van-der-waals E 5 U C2' 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CB 4.89 Å van-der-waals E 6 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CG 4.57 Å van-der-waals E 5 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG O 3.13 Å hbond E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CA 4.64 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP N 3.22 Å hbond E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS C 4.01 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CD2 4.24 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CA 4.73 Å van-der-waals E 6 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CB 3.82 Å van-der-waals E 6 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP CA 4.14 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS NE2 3.62 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 228 ARG C 4.2 Å van-der-waals E 5 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CG 4.71 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP OD1 3.99 Å van-der-waals E 6 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CG 4.72 Å van-der-waals E 6 U N3 3VAGE00 Lig113
P26368_linker1 3VAG B 227 ARG C 4.82 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS ND1 3.96 Å van-der-waals E 5 U N1 3VAGE00 Lig113
P26368_linker1 3VAG B 260 LYS CD 4.55 Å van-der-waals P 4 U O4 3VAGP00 Lig113
P26368_linker1 3VAG B 230 HIS N 3.78 Å van-der-waals E 5 U C2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS NE2 3.5 Å van-der-waals E 5 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CB 4.07 Å van-der-waals E 5 U O2 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CD2 4.49 Å van-der-waals E 5 U N1 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP OD1 2.97 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 227 ARG CA 4.62 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP OD2 3.56 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP CB 4.97 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CD2 4.47 Å van-der-waals E 5 U C5 3VAGE00 Lig113
P26368_linker1 3VAG B 227 ARG CB 3.24 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 231 ASP CG 4.03 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS ND1 4.35 Å van-der-waals E 5 U C1' 3VAGE00 Lig113
P26368_linker1 3VAG B 227 ARG CG 4.74 Å van-der-waals E 5 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CA 3.87 Å van-der-waals E 6 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 229 PRO CA 4.49 Å van-der-waals E 6 U C4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS NE2 4.05 Å van-der-waals E 5 U C6 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS CD2 4.15 Å van-der-waals E 5 U O4 3VAGE00 Lig113
P26368_linker1 3VAG B 230 HIS N 3.06 Å hbond E 5 U O2 3VAGE00 Lig113