Linker Name | PDB ID | Linker Chain | Amino Acid Position | Amino Acid | Amino Acid Atom | Contact Distance | Interaction Type | Nucleotide Chain | Nucleotide Position | Nucleotide | Nucleotide Atom | Ligand Structurename | Ligand ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P26368_linker1 | 3VAI | B | 231 | ASP | OD2 | 4.63 Å | van-der-waals | E | 7 | C | N4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 230 | HIS | C | 4.13 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | CA | 4.52 Å | van-der-waals | E | 6 | U | C4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | OD2 | 4.16 Å | van-der-waals | E | 6 | U | N3 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | OD1 | 3.95 Å | van-der-waals | E | 6 | U | N3 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 260 | LYS | CE | 4.67 Å | van-der-waals | P | 4 | U | C4 | 3VAIP00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | CB | 3.93 Å | van-der-waals | E | 6 | U | N3 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | CG | 4.32 Å | van-der-waals | E | 6 | U | N3 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | OD1 | 3.8 Å | van-der-waals | E | 6 | U | C4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 230 | HIS | 3.58 Å | stack | E | 5 | BRU | 3VAIE00 | Lig208 | ||
P26368_linker1 | 3VAI | B | 231 | ASP | OD1 | 2.88 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 260 | LYS | CE | 4.82 Å | van-der-waals | P | 4 | U | N3 | 3VAIP00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | CG | 4.72 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 260 | LYS | NZ | 2.87 Å | hbond | P | 4 | U | O4 | 3VAIP00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | OD2 | 4.01 Å | van-der-waals | E | 6 | U | C4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 230 | HIS | N | 4.19 Å | van-der-waals | E | 6 | U | C4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 230 | HIS | N | 4.76 Å | van-der-waals | E | 6 | U | C5 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 260 | LYS | NZ | 4.07 Å | van-der-waals | P | 4 | U | N3 | 3VAIP00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | CA | 3.97 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | N | 3.29 Å | hbond | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 260 | LYS | CD | 4.53 Å | van-der-waals | P | 4 | U | O4 | 3VAIP00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | N | 4.51 Å | van-der-waals | E | 6 | U | C4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | CA | 4.15 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | CG | 4.71 Å | van-der-waals | E | 6 | U | N3 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 260 | LYS | CE | 3.71 Å | van-der-waals | P | 4 | U | O4 | 3VAIP00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | CB | 3.42 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 230 | HIS | CB | 4.28 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | C | 3.93 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | O | 4.9 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | CB | 4.9 Å | van-der-waals | E | 6 | U | C4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 230 | HIS | CA | 4.07 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | CA | 4.8 Å | van-der-waals | E | 6 | U | N3 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | CB | 4.99 Å | van-der-waals | E | 6 | U | C2 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | CG | 4 Å | van-der-waals | E | 6 | U | C4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | CG | 3.11 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 230 | HIS | N | 3.34 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | CB | 3.96 Å | van-der-waals | E | 6 | U | C4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | CB | 3.85 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 229 | PRO | C | 4.77 Å | van-der-waals | E | 6 | U | C4 | 3VAIE00 | Lig208 |
P26368_linker1 | 3VAI | B | 260 | LYS | NZ | 3.85 Å | van-der-waals | P | 4 | U | C4 | 3VAIP00 | Lig208 |
P26368_linker1 | 3VAI | B | 231 | ASP | OD2 | 3.45 Å | van-der-waals | E | 6 | U | O4 | 3VAIE00 | Lig208 |