Linker Name | PDB ID | Linker Chain | Amino Acid Position | Amino Acid | Amino Acid Atom | Contact Distance | Interaction Type | Nucleotide Chain | Nucleotide Position | Nucleotide | Nucleotide Atom | Ligand Structurename | Ligand ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P26368_linker1 | 3VAL | A | 229 | PRO | CB | 3.62 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | CB | 4.1 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | CB | 4.65 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | CA | 4.46 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | CG | 4.08 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | N | 4.81 Å | van-der-waals | P | 6 | U | C5 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | 3.19 Å | stack | P | 6 | U | 3VALP00 | Lig55 | ||
P26368_linker1 | 3VAL | A | 230 | HIS | N | 4.63 Å | van-der-waals | P | 6 | U | C5 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | CB | 4.74 Å | van-der-waals | P | 6 | U | C5 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | CG | 4.55 Å | van-der-waals | P | 6 | U | C5 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | N | 4.92 Å | van-der-waals | P | 6 | U | N3 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | N | 3.9 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | OD2 | 4.7 Å | van-der-waals | P | 6 | U | C6 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | C | 4.8 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 260 | LYS | CE | 4.44 Å | van-der-waals | H | 4 | U | N3 | 3VALH00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | C | 4.97 Å | hbond | P | 6 | U | N3 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | OD2 | 3.21 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | CG | 3.38 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | N | 3.08 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | OD1 | 4.19 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 260 | LYS | CE | 4.25 Å | van-der-waals | H | 4 | U | C4 | 3VALH00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | OD2 | 3.86 Å | van-der-waals | P | 6 | U | C5 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 260 | LYS | CD | 4.06 Å | van-der-waals | H | 4 | U | O4 | 3VALH00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | C | 4.64 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | CB | 4.92 Å | van-der-waals | P | 6 | U | C2 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | N | 4.72 Å | van-der-waals | P | 6 | U | N3 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | OD2 | 3.54 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | C | 3.64 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | CB | 3.94 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | CB | 4.96 Å | van-der-waals | P | 6 | U | N3 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | N | 2.75 Å | hbond | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | CA | 4.56 Å | van-der-waals | P | 6 | U | N3 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 260 | LYS | CE | 3.28 Å | van-der-waals | H | 4 | U | O4 | 3VALH00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | CA | 4.79 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | O | 4.39 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | C | 4.46 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 260 | LYS | NZ | 4.43 Å | van-der-waals | H | 4 | U | O4 | 3VALH00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | CA | 3.63 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | CG | 4.94 Å | van-der-waals | P | 6 | U | N3 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | OD1 | 4.92 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | CA | 4.63 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | CB | 3.36 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | CG | 4.95 Å | van-der-waals | P | 6 | U | N3 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | OD2 | 4.27 Å | van-der-waals | P | 6 | U | N3 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | O | 4.81 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | N | 3.97 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | C | 3.6 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 232 | TYR | N | 4.82 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 231 | ASP | CB | 4.3 Å | van-der-waals | P | 6 | U | C4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 229 | PRO | CB | 3.86 Å | van-der-waals | P | 6 | U | N3 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | 3.18 Å | stack | P | 5 | BRU | 3VALP00 | Lig55 | ||
P26368_linker1 | 3VAL | A | 229 | PRO | CA | 3.92 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |
P26368_linker1 | 3VAL | A | 230 | HIS | CA | 3.68 Å | van-der-waals | P | 6 | U | O4 | 3VALP00 | Lig55 |