Linker Name | PDB ID | Linker Chain | Amino Acid Position | Amino Acid | Amino Acid Atom | Contact Distance | Interaction Type | Nucleotide Chain | Nucleotide Position | Nucleotide | Nucleotide Atom | Ligand Structurename | Ligand ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P26368_linker1 | 3VAL | I | 231 | ASP | N | 4.92 Å | van-der-waals | K | 6 | U | N3 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 260 | LYS | CE | 4.9 Å | van-der-waals | E | 4 | U | N3 | 3VALE00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CA | 3.64 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | N | 4.76 Å | van-der-waals | K | 6 | U | N3 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | C | 4.81 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | O | 4.83 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | OD2 | 4.49 Å | van-der-waals | K | 7 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | CB | 4.64 Å | van-der-waals | K | 6 | U | C5 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 260 | LYS | CE | 4.54 Å | van-der-waals | E | 4 | U | C4 | 3VALE00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | CB | 3.87 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | N | 2.78 Å | hbond | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 260 | LYS | NZ | 2.68 Å | hbond | E | 4 | U | O4 | 3VALE00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | CA | 4.61 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | C | 4.53 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | CA | 3.6 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | C | 3.52 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CA | 4.56 Å | van-der-waals | K | 6 | U | N3 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | CB | 4.32 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 260 | LYS | NZ | 4.85 Å | van-der-waals | E | 4 | U | C5 | 3VALE00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | C | 3.64 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | CG | 4.04 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CB | 4.97 Å | van-der-waals | K | 6 | U | C5 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 260 | LYS | CD | 4.49 Å | van-der-waals | E | 4 | U | O4 | 3VALE00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | CG | 4.77 Å | van-der-waals | K | 6 | U | N3 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | C | 4.45 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | N | 3.79 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CB | 3.72 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | CB | 3.47 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CA | 4.26 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | 3.39 Å | stack | K | 5 | BRU | 3VALK00 | Lig55 | ||
P26368_linker1 | 3VAL | I | 231 | ASP | CG | 3.44 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | N | 4.44 Å | van-der-waals | K | 6 | U | C5 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | 3.31 Å | stack | K | 6 | U | 3VALK00 | Lig55 | ||
P26368_linker1 | 3VAL | I | 231 | ASP | OD1 | 4.85 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | N | 4.84 Å | van-der-waals | K | 6 | U | C5 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | CA | 3.68 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | CB | 4.86 Å | van-der-waals | K | 6 | U | N3 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CB | 4.8 Å | hbond | K | 6 | U | C2 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 232 | TYR | N | 4.91 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | OD2 | 3.31 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CG | 4.96 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 260 | LYS | NZ | 4.11 Å | van-der-waals | E | 4 | U | N3 | 3VALE00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | CB | 4.62 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | OD1 | 4.2 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | N | 3.98 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | OD2 | 4.09 Å | van-der-waals | K | 6 | U | N3 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CG | 4.6 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | O | 4.51 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 260 | LYS | NZ | 3.65 Å | van-der-waals | E | 4 | U | C4 | 3VALE00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | CG | 4.89 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CB | 3.67 Å | van-der-waals | K | 6 | U | N3 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | OD2 | 3.52 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | OD2 | 4.89 Å | van-der-waals | K | 6 | U | C2 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CG | 4.57 Å | van-der-waals | K | 6 | U | N3 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | OD2 | 3.93 Å | van-der-waals | K | 6 | U | C5 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 229 | PRO | CB | 3.18 Å | van-der-waals | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | CG | 4.58 Å | van-der-waals | K | 6 | U | C5 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 230 | HIS | N | 2.87 Å | hbond | K | 6 | U | O4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | OD2 | 4.68 Å | van-der-waals | K | 6 | U | C6 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | CA | 4.79 Å | van-der-waals | K | 6 | U | C4 | 3VALK00 | Lig55 |
P26368_linker1 | 3VAL | I | 260 | LYS | CE | 3.45 Å | van-der-waals | E | 4 | U | O4 | 3VALE00 | Lig55 |
P26368_linker1 | 3VAL | I | 231 | ASP | CB | 4.97 Å | van-der-waals | K | 7 | U | O4 | 3VALK00 | Lig55 |