Linker Name | PDB ID | Linker Chain | Amino Acid Position | Amino Acid | Amino Acid Atom | Contact Distance | Interaction Type | Nucleotide Chain | Nucleotide Position | Nucleotide | Nucleotide Atom | Ligand Structurename | Ligand ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P26368_linker1 | 4TU8 | A | 231 | ASP | CG | 3.78 Å | van-der-waals | P | 7 | U | O4 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD2 | 4.56 Å | van-der-waals | P | 6 | A | C6 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | CG | 4.47 Å | van-der-waals | P | 7 | U | C4 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD1 | 2.82 Å | van-der-waals | P | 7 | U | O4 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD2 | 4.91 Å | van-der-waals | P | 7 | U | C4 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD1 | 3.91 Å | van-der-waals | P | 6 | A | N6 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 229 | PRO | CG | 4.22 Å | van-der-waals | P | 6 | A | N6 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 229 | PRO | CB | 4.98 Å | van-der-waals | P | 6 | A | C5 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | CG | 4.25 Å | van-der-waals | P | 7 | U | N3 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD1 | 4.75 Å | van-der-waals | P | 7 | U | O2 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD2 | 4.41 Å | van-der-waals | P | 7 | U | O4 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | CB | 4.66 Å | van-der-waals | P | 7 | U | O4 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD1 | 4.44 Å | van-der-waals | P | 7 | U | C2 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD1 | 4.9 Å | van-der-waals | P | 6 | A | C6 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 229 | PRO | CA | 4.91 Å | van-der-waals | P | 6 | A | N6 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD2 | 3.27 Å | hbond | P | 6 | A | N6 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 230 | HIS | 3.43 Å | stack | P | 5 | BRU | 4TU8P00 | Lig61 | ||
P26368_linker1 | 4TU8 | A | 229 | PRO | CB | 4.4 Å | van-der-waals | P | 6 | A | C6 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 229 | PRO | CG | 4.85 Å | van-der-waals | P | 6 | A | C6 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 229 | PRO | CB | 3.6 Å | van-der-waals | P | 6 | A | N6 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD2 | 4.5 Å | van-der-waals | P | 7 | U | N3 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD1 | 4.88 Å | van-der-waals | P | 7 | U | C5 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD1 | 3.44 Å | van-der-waals | P | 7 | U | C4 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | OD1 | 3.23 Å | hbond | P | 7 | U | N3 | 4TU8P00 | Lig61 |
P26368_linker1 | 4TU8 | A | 231 | ASP | CG | 3.99 Å | van-der-waals | P | 6 | A | N6 | 4TU8P00 | Lig61 |