RNA-binding protein putative

Protein information

  • Protein ID: Q4DY32
  • Protein Name : RNA-binding protein putative
  • Gene : Tc00.1047053511727.270
  • Organism : Trypanosoma cruzi (strain CL Brener)
  • Status : unreviewed
  • Function :

Protein Sequence

  • MPAKSANKPASKPASKPAAKPAAKPAAKAPAPKAEKKGAAKAPAPKAAAPAPKAAAAAPKPAVRDAKQRSDAANHNGLYVKNWGQGSVDDARALFGTAGKVVGVRVRRRRYAIIFFENAAAVKKAIDLFNGKEFMGNVLSVVPAKTTPKPDPHANSSVVFVSPIFRASTTKKQILELFSGMKVLRLRTYRNNYAYVYLDTPAAAQRAVKEKNGAEFRGKQLRVALSTRSLAKDRARAERARLLMAAQKFNKRKNHTK

RRM domains in this Protein - 2 

RRM Entryname RRM Sequence range Pfam ID
Q4DY32_RRM1 85 - 140 PF00076
Q4DY32_RRM2 159 - 222 PF00076

RRM domain Linkers in this Protein - 1 

Linker Name Linker Sequence range
Q4DY32_linker1 141 - 158

Experiments retrieved for this Protein - 2 

Experiment ID Experiment Type PubMed ID
Exp_5OPT EM 29107485
Exp_7ASE EM 33357443

Ligands tested for Binding - 2 

Ligand ID Ligand Type Ligand Sequence
Lig58 RNA UGAUCUGGUUGAUUCUGCCAGUAGUCAUAUGCUUGUUUCAAGGACUUAGCCAUGCAUGCCUCAGAAUCACUGCAUUGCAGGAAUCUGCGCAUGGCUCAUUACAUCAGACGUAAUCUGCCGCAAAAAUCUUGCGGUCUCCGCAACAUUGGAUAACUUGGCGAAACGCCAAGCUAAUACAUGAACCAACCGGAUGUUCUCUGUUCCGGCGGCAGGGCAACCUGCUGCCAUGGGACGUCCAGCGAAUGAAUGAAAGUAAAACCAAUGCCUUCACCGGCAGUAACACUCAGAAGUGUUGAUUCAAUUCAUUCCGUGCGAAAGCCGGGUUUUUUUAUCCGGCGUCUUUUGACGAACAACUGCCCUAUCAGCCAGCGAUGGCCGUGUAGUGGACUGCCAUGGCGUUGACGGGAGCGGGGGAUUAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAAUAGCUACCACUUCUACGGAGGGCAGCAGGCGCGCAAAUUGCCCAAUGUCAAAAAAAAAAGAUGAGGCAGCGAAAAGAAAUAGAGCCGACAGUGCUUUUGCAUUGUCGUUUUCAAUGGGGGAUAUUUAAACCCAUCCAAAAUCGAGUAACAAUUGGAGGACAAGUCUGGUGCCAGCACCCGCGGUAAUUCCAGCUCCAAAAGCGUAUAUUAAUGCUGUUGCUGUUAAAGGGUUCGUAGUUGAAUUGAGGGCCUCUAAGGCGCAAUGGUUUAGUCCCAUCCACUUCGGAUUGGUGACCCAUGCCCUUGUGGUCCGUGAACAGACAUUCAGAAACAAAAAACACGGGAGUGGUACCUUUCCUGAUUAUCGCAUGUCAUGCAUGCCAGAGGGCGCCCGUGAUUUUUUACUGUGACUAAAAAAGUGUGACCAAAGCAGUCAUUCGACUUGAAUUAGAAAGCAUGGGAUAACAAAGGAGCAGCCUCUGGGCCACCGUUUCGGCUUUUGUUGGUUUUAAAAGUCCAUUGGAGAUUAUGGGGCAGUGUGACAAGCGGCUGGGUGGUUAUUCCACACACACACACACACGCUCCUUUUUUUUGGACGUGUUUUGUGUGUGUAUGUGGCACUCGUCGCCUUUGUGGGAAAUCCGUGUGGCACUGUGUUUGAUGUUGUUGGCAGAGACUUCGGUCUUUUGCCUUCGCAUAUUUCACACAUGUGUCAUGCCUUCCCUCAACUCACGGCAUCCAGGAAUGAAGGAGGGUAGUUCGGGGGAGAACGUACUGGUGCGUCAGAGGUGAAAUUCUUAGACCGCACCAAGACGAACUACAGCGAAGGCAUUCUUCAAGGAUACCUUCCUCAAUCAAGAACCAAAGUGUGGGGAUCGAAGAUGAUUAGAGACCAUUGUAGUCCACACUGCAAACGAUGACACCCAUGAAUUGGGGAGUUUUUGGUCGUAGGCGUGGUCGGGCUUGAUUAUUAUUUUUCAUCCCGUUCCUCGUCUCGCCAAUGAAUAUUAAAUUUACGUGCAUAUUCUUUUUGGUCUUCGUUUUUUUACGGCGAGGGCCUUUAACGGGAAUAUCCUCAGCACGUUAUCUGACUUCUUCACGCGAAAGCUUUGAGGUUACAGUCUCAGGGGGGAGUACGUUCGCAAGAGUGAAACUUAAAGAAAUUGACGGAAUGGCACCACAAGACGUGGAGCGUGCGGUUUAAUUUGACUCAACACGGGGAACUUUACCAGAUCCGGACAGGGUGAGGAUUGACAGAUUGAGUGUUCUUUCUCGAUCCCCUGAAUGGUGGUGCAUGGCCGCUUUUGGUCGGUGGAGUGAUUUGUUUGGUUGAUUCCGUCAACGGACGAGAUCCAAGCUGCCCAGUAGGAUUCAGAAUUGCCCAUAGGAUAGCAAUCCCUUCCGCGGGUUUUACCCAAGGGGGGGCGGUAUUCGCUUGUAUCCUUCUCUGCGGGAUUCCUUGUUUUGCGCAAGGUGAGAUUUUGGGCAACAGCAGGUCUGUGAUGCUCCUCAAUGUUCUGGGCGACACGCGCACUACAAUGUCAGUGAGAACAAGAAAAACGACUCUUGUCGGACCUACUUGAUCAAAAGAGUGGGAAAACCCCGGAAUCACGUAGACCCACUUGGGACCGAGUAUUGCAAUUAUUGGUCGCGCAACGAGGAAUGUCUCGUAGGCGCAGCUCAUCAAACUGUGCCGAUUACGUCCCUGCCAUUUGUACACACCGCCCGUCGUUGUUUCCGAUGAUGGUGCAAUACAGGUGAUCGGACAGUCGAGUGCUUCACUUGACCGAAAGUUCACCGAUAUUUCUUCAAUAGAGGAAGCAAAAGUCGUAACAAGGUAGCUGUAGGUGAACCUGCAGCUGGAUCAUUU
Lig58 RNA UGAUCUGGUUGAUUCUGCCAGUAGUCAUAUGCUUGUUUCAAGGACUUAGCCAUGCAUGCCUCAGAAUCACUGCAUUGCAGGAAUCUGCGCAUGGCUCAUUACAUCAGACGUAAUCUGCCGCAAAAAUCUUGCGGUCUCCGCAACAUUGGAUAACUUGGCGAAACGCCAAGCUAAUACAUGAACCAACCGGAUGUUCUCUGUUCCGGCGGCAGGGCAACCUGCUGCCAUGGGACGUCCAGCGAAUGAAUGAAAGUAAAACCAAUGCCUUCACCGGCAGUAACACUCAGAAGUGUUGAUUCAAUUCAUUCCGUGCGAAAGCCGGGUUUUUUUAUCCGGCGUCUUUUGACGAACAACUGCCCUAUCAGCCAGCGAUGGCCGUGUAGUGGACUGCCAUGGCGUUGACGGGAGCGGGGGAUUAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAAUAGCUACCACUUCUACGGAGGGCAGCAGGCGCGCAAAUUGCCCAAUGUCAAAAAAAAAAGAUGAGGCAGCGAAAAGAAAUAGAGCCGACAGUGCUUUUGCAUUGUCGUUUUCAAUGGGGGAUAUUUAAACCCAUCCAAAAUCGAGUAACAAUUGGAGGACAAGUCUGGUGCCAGCACCCGCGGUAAUUCCAGCUCCAAAAGCGUAUAUUAAUGCUGUUGCUGUUAAAGGGUUCGUAGUUGAAUUGAGGGCCUCUAAGGCGCAAUGGUUUAGUCCCAUCCACUUCGGAUUGGUGACCCAUGCCCUUGUGGUCCGUGAACAGACAUUCAGAAACAAAAAACACGGGAGUGGUACCUUUCCUGAUUAUCGCAUGUCAUGCAUGCCAGAGGGCGCCCGUGAUUUUUUACUGUGACUAAAAAAGUGUGACCAAAGCAGUCAUUCGACUUGAAUUAGAAAGCAUGGGAUAACAAAGGAGCAGCCUCUGGGCCACCGUUUCGGCUUUUGUUGGUUUUAAAAGUCCAUUGGAGAUUAUGGGGCAGUGUGACAAGCGGCUGGGUGGUUAUUCCACACACACACACACACGCUCCUUUUUUUUGGACGUGUUUUGUGUGUGUAUGUGGCACUCGUCGCCUUUGUGGGAAAUCCGUGUGGCACUGUGUUUGAUGUUGUUGGCAGAGACUUCGGUCUUUUGCCUUCGCAUAUUUCACACAUGUGUCAUGCCUUCCCUCAACUCACGGCAUCCAGGAAUGAAGGAGGGUAGUUCGGGGGAGAACGUACUGGUGCGUCAGAGGUGAAAUUCUUAGACCGCACCAAGACGAACUACAGCGAAGGCAUUCUUCAAGGAUACCUUCCUCAAUCAAGAACCAAAGUGUGGGGAUCGAAGAUGAUUAGAGACCAUUGUAGUCCACACUGCAAACGAUGACACCCAUGAAUUGGGGAGUUUUUGGUCGUAGGCGUGGUCGGGCUUGAUUAUUAUUUUUCAUCCCGUUCCUCGUCUCGCCAAUGAAUAUUAAAUUUACGUGCAUAUUCUUUUUGGUCUUCGUUUUUUUACGGCGAGGGCCUUUAACGGGAAUAUCCUCAGCACGUUAUCUGACUUCUUCACGCGAAAGCUUUGAGGUUACAGUCUCAGGGGGGAGUACGUUCGCAAGAGUGAAACUUAAAGAAAUUGACGGAAUGGCACCACAAGACGUGGAGCGUGCGGUUUAAUUUGACUCAACACGGGGAACUUUACCAGAUCCGGACAGGGUGAGGAUUGACAGAUUGAGUGUUCUUUCUCGAUCCCCUGAAUGGUGGUGCAUGGCCGCUUUUGGUCGGUGGAGUGAUUUGUUUGGUUGAUUCCGUCAACGGACGAGAUCCAAGCUGCCCAGUAGGAUUCAGAAUUGCCCAUAGGAUAGCAAUCCCUUCCGCGGGUUUUACCCAAGGGGGGGCGGUAUUCGCUUGUAUCCUUCUCUGCGGGAUUCCUUGUUUUGCGCAAGGUGAGAUUUUGGGCAACAGCAGGUCUGUGAUGCUCCUCAAUGUUCUGGGCGACACGCGCACUACAAUGUCAGUGAGAACAAGAAAAACGACUCUUGUCGGACCUACUUGAUCAAAAGAGUGGGAAAACCCCGGAAUCACGUAGACCCACUUGGGACCGAGUAUUGCAAUUAUUGGUCGCGCAACGAGGAAUGUCUCGUAGGCGCAGCUCAUCAAACUGUGCCGAUUACGUCCCUGCCAUUUGUACACACCGCCCGUCGUUGUUUCCGAUGAUGGUGCAAUACAGGUGAUCGGACAGUCGAGUGCUUCACUUGACCGAAAGUUCACCGAUAUUUCUUCAAUAGAGGAAGCAAAAGUCGUAACAAGGUAGCUGUAGGUGAACCUGCAGCUGGAUCAUUU