Q8MV46_RRM1

Protein information

  • Protein ID: Q8MV46
  • Protein Name: U-rich RNA-binding protein UBP-2
  • Organism: Trypanosoma cruzi
  • Gene Name: C3747_9g154

Domain information

  • Pfam ID: PF00076
  • Pfam Clan Name: RRM
  • Domain Range: 31 - 101
  • Domain Length: 71

Domain Sequence

  • LMVNYIPTTVDEVQLRQLFERYGPIESVKIVADRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLK

Binding Experiments for this domain - 5 

Experiment ID RRM Entryname Experiment Type Ligand ID Binds? Binding Affinity
Exp_354 Q8MV46_RRM1 EMSA Lig336 Yes 250 ± 10 nM
Exp_355 Q8MV46_RRM1 EMSA Lig320 Yes 100 ± 5 nM
Exp_356 Q8MV46_RRM1 EMSA Lig329 Yes 750 ± 65 nM
Exp_357 Q8MV46_RRM1 EMSA Lig282 Yes 850 ± 55 nM
Exp_358 Q8MV46_RRM1 EMSA Lig276 Yes 200 ± 15 nM

Ligands tested for Binding - 5 

Ligand ID Ligand Type Ligand Sequence
Lig276 RNA GUUUUGUUUUUGUGGGUG
Lig282 RNA AUGGUGUUGGUGUUGGUG
Lig320 RNA GUUUUGUUUUUGUUUUUG
Lig329 RNA AUGUUGUUGUUGUUGUUG
Lig336 RNA AUUUUAUUUUUAUUUUUA