Lig128

Ligand information

  • Ligand ID: Lig128
  • Ligand Type : RNA
  • Ligand Length : 72
  • Ligand Sequence : GGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUACAAAGAGACC

Available Structures for this Ligand- 2

Ligand Structurename PDB ID Chain ID
5TF6B00 5TF6 B
5TF6D00 5TF6 D

Binding Information from Structures

Experiment ID RRM Structure RRM Entryename Experiment Type Ligand ID Contacts
Exp_5TF6 5TF6A01 P49960_RRM1 X-ray Diffraction Lig128 Contacts
Exp_5TF6 5TF6A02 P49960_RRM2 X-ray Diffraction Lig128 Contacts
Exp_5TF6 5TF6A03 P49960_RRM3 X-ray Diffraction Lig128 Contacts
Exp_5TF6 5TF6A04 P49960_RRM4 X-ray Diffraction Lig128 Contacts
Exp_5TF6 5TF6C01 P49960_RRM1 X-ray Diffraction Lig128 Contacts
Exp_5TF6 5TF6C02 P49960_RRM2 X-ray Diffraction Lig128 Contacts
Exp_5TF6 5TF6C03 P49960_RRM3 X-ray Diffraction Lig128 Contacts
Exp_5TF6 5TF6C04 P49960_RRM4 X-ray Diffraction Lig128 Contacts

RRM domains tested for Binding - 4 

RRM Entryname Sequence Range RRM Sequence
P49960_RRM1 43 - 110 VLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVVGQNEII
P49960_RRM2 119 - 189 LWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLV
P49960_RRM3 212 - 283 IMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQMNRSLLGNREIS
P49960_RRM4 311 - 393 ETLICLFPLSDKVSPSLICQFLQEEIHINEKDIRKILLVSDFNGAIIIFRDSKFAAKMLMILNGSQFQGKVIRSGTINDMKRY