Q00916_RRM1

Protein information

  • Protein ID: Q00916
  • Protein Name: U1 small nuclear ribonucleoprotein 70 kDa homolog
  • Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
  • Gene Name: SNP1

Domain information

  • Pfam ID: PF00076
  • Pfam Clan Name: RRM
  • Domain Range: 109 - 176
  • Domain Length: 68

Domain Sequence

  • IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQI

Available Structures for this domain - 7 

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_5ZWN 5ZWNQ01 EM No contacts
Exp_6G90 6G90B01 EM Lig24 Contacts
Exp_6N7P 6N7PA01 EM No contacts
Exp_6N7R 6N7RA01 EM No contacts
Exp_6N7X 6N7XA01 EM No contacts
Exp_7OQC 7OQCB01 EM No contacts
Exp_7OQE 7OQEB01 EM No contacts

Ligands tested for Binding - 1 

Ligand ID Ligand Type Ligand Sequence
Lig24 RNA AUACUUACCUUAAGAUAUCAGAGGAGAUCAAGAAGUCCUACUGAUCAAACAUGCGCUUCCAAUAGUAGAAGGACGUUAAGCAUUUAUCAUUGAACUAUAAUUGUUCAUUGAAGUCAUUGAUGCAAACUCCUUGGUCACACACACAUACGGCGCGGAAGGCGUGUUUGCUGACGUUUCCAUUCCCUUGUUUCAAUCAUUGGUUAAUCCCUUGAUUCCUUUGGGGAUUUUUGGGUUAAACUGAUUUUUGGGGCCCUUUGUUUCUUCUGCCUGGAGAAGUUUGACACCAAAUUCAAAUUGGUGUUAGGGGAGCUGGGGCCUUUCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUUGGAAGGUCUUGGUCGGGUGGAUCUUAUAAUUUUUGAUUUAUUUU