Exp_6G90

Experiment information

  • Experiment ID: Exp_6G90
  • PubMed ID : 29995849
  • Experiment Type : EM
  • PDB ID : 6G90

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P40567 111
Q00539 523
Q00916 300
Q99181 213

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
P40567_RRM1 5 - 110 6G90Y01
Q00539_RRM2 315 - 379 6G90F01
Q00916_RRM1 109 - 176 6G90B01
Q99181_RRM1 11 - 82 6G90R01
Q99181_RRM2 110 - 179 6G90R02

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_6G90 6G90B01 EM Lig24 Contacts
Exp_6G90 6G90F01 EM No contacts
Exp_6G90 6G90R01 EM Lig52 Contacts
Exp_6G90 6G90R02 EM Lig49 Contacts
Exp_6G90 6G90Y01 EM Lig49 Contacts

Ligands tested for Binding - 3 

Ligand ID Ligand Type Ligand Sequence
Lig24 RNA AUACUUACCUUAAGAUAUCAGAGGAGAUCAAGAAGUCCUACUGAUCAAACAUGCGCUUCCAAUAGUAGAAGGACGUUAAGCAUUUAUCAUUGAACUAUAAUUGUUCAUUGAAGUCAUUGAUGCAAACUCCUUGGUCACACACACAUACGGCGCGGAAGGCGUGUUUGCUGACGUUUCCAUUCCCUUGUUUCAAUCAUUGGUUAAUCCCUUGAUUCCUUUGGGGAUUUUUGGGUUAAACUGAUUUUUGGGGCCCUUUGUUUCUUCUGCCUGGAGAAGUUUGACACCAAAUUCAAAUUGGUGUUAGGGGAGCUGGGGCCUUUCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUUGGAAGGUCUUGGUCGGGUGGAUCUUAUAAUUUUUGAUUUAUUUU
Lig49 RNA AAGUGUAGUAUCUGUUCUUUUCAGUGUAACAACUGAAAUGACCUAGGCUCAUACACAUUUUUUGGCAGGACGGGAAGAGGAGACGUCGCGACCCUCGCAGAGUCGUUCUUGACUUGGUCGCUUGAUGUUUCUUCUUCCCGUUC
Lig52 RNA AGGUAUGUCUAACUUCUCUUAUUUACAAACAAAAUCAA

Ligand Structures from this Experiment - 3 

Ligand Structurename PDB ID Chain ID Ligand ID
6G90100 6G90 1 Lig24
6G90200 6G90 2 Lig49
6G90I00 6G90 I Lig52