Q9BTD8_RRM1

Protein information

  • Protein ID: Q9BTD8
  • Protein Name: RNA-binding protein 42
  • Organism: Homo sapiens
  • Gene Name: RBM42

Domain information

  • Pfam ID: PF00076
  • Pfam Clan Name: RRM
  • Domain Range: 383 - 453
  • Domain Length: 71

Domain Sequence

  • IFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSRPIK

Available Structures for this domain - 4 

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_6QW6 6QW6R01 EM Lig168 Contacts
Exp_6QW6 6QW6R01 EM Lig39 Contacts
Exp_6QX9 6QX9R01 EM Lig168 Contacts
Exp_6QX9 6QX9R01 EM Lig89 Contacts

Ligands tested for Binding - 3 

Ligand ID Ligand Type Ligand Sequence
Lig168 RNA XAGCUUUGCGCAGUGGCAGUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGCAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUACGGAGACUGG
Lig39 RNA GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUUU
Lig89 RNA GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUU