2VOOD00

Structural information

  • Experiment ID: Exp_2VOO
  • Experiment Type : X-ray Diffraction
  • PubMed ID : 18547518
  • Ligand ID: Lig54
  • PDB ID : 2VOO
  • PDB Chain ID : D

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P05455 408

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig54 7 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
2VOO B 23 TYR CD2 4.62 Å van-der-waals C2' U -2 2VOOD00
2VOO B 55 PHE CZ 4.33 Å van-der-waals C2' U -1 2VOOD00
2VOO B 139 ASN OD1 3.84 Å van-der-waals C5 U -2 2VOOD00
2VOO B 55 PHE CD1 3.58 Å van-der-waals C6 U -1 2VOOD00
2VOO B 144 ARG CZ 4.95 Å ionic OP2 U -2 2VOOD00

Complete list of contacts