3VAFP00

Structural information

  • Experiment ID: Exp_3VAF
  • Experiment Type : X-ray Diffraction
  • PubMed ID : 23376934
  • Ligand ID: Lig54
  • PDB ID : 3VAF
  • PDB Chain ID : P

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P26368 475

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig54 7 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
3VAF B 262 PHE CZ 4.42 Å van-der-waals C2' U 2 3VAFP00
3VAF A 231 ASP OD2 4.05 Å van-der-waals C4 U 6 3VAFP00
3VAF A 150 ARG CZ 3.76 Å van-der-waals C6 U 7 3VAFP00
3VAF B 302 TYR CA 4.98 Å van-der-waals O5' U 2 3VAFP00
3VAF B 262 PHE CD2 3.97 Å van-der-waals C4 U 3 3VAFP00

Complete list of contacts