5DDOB00

Structural information

  • Experiment ID: Exp_5DDO
  • Experiment Type : X-ray Diffraction
  • PubMed ID : 26655897
  • Ligand ID: Lig195
  • PDB ID : 5DDO
  • PDB Chain ID : B

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P09012 282

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig195 61 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5DDO C 24 ASP CB 4.96 Å van-der-waals C4' G 18 5DDOB00
5DDO C 85 GLN O 4.98 Å van-der-waals N4 C 39 5DDOB00
5DDO C 56 PHE CD1 4.03 Å van-der-waals N6 A 40 5DDOB00
5DDO C 24 ASP OD2 2.8 Å hbond OP1 G 19 5DDOB00
5DDO C 54 GLN OE1 3.79 Å van-der-waals C1' G 38 5DDOB00

Complete list of contacts