5DDPA00

Structural information

  • Experiment ID: Exp_5DDP
  • Experiment Type : X-ray Diffraction
  • PubMed ID : 26655897
  • Ligand ID: Lig85
  • PDB ID : 5DDP
  • PDB Chain ID : A

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P09012 282

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig85 61 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5DDP A 101 GLN 3.12 Å stack G 23 5DDPA00
5DDP A 101 GLN 3.22 Å stack G 22 5DDPA00
5DDP D 4 GLU CA 4.74 Å van-der-waals N4 C 39 5DDPA00
5DDP D 4 GLU CB 3.54 Å van-der-waals N4 C 39 5DDPA00
5DDP D 4 GLU CB 4.6 Å van-der-waals C4 C 39 5DDPA00

Complete list of contacts