5DDRA00

Structural information

  • Experiment ID: Exp_5DDR
  • Experiment Type : X-ray Diffraction
  • PubMed ID : 26655897
  • Ligand ID: Lig85
  • PDB ID : 5DDR
  • PDB Chain ID : A

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P09012 282

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig85 61 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5DDR D 53 GLN CD 4.65 Å van-der-waals N3 G 38 5DDRA00
5DDR D 50 MET CE 4.04 Å van-der-waals O4' A 40 5DDRA00
5DDR D 15 ASN CA 4.12 Å van-der-waals N3 U 37 5DDRA00
5DDR D 87 LYS CD 4.35 Å van-der-waals N3 C 39 5DDRA00
5DDR D 12 TYR CD2 3.43 Å van-der-waals C4 C 39 5DDRA00

Complete list of contacts