5DDRB00

Structural information

  • Experiment ID: Exp_5DDR
  • Experiment Type : X-ray Diffraction
  • PubMed ID : 26655897
  • Ligand ID: Lig85
  • PDB ID : 5DDR
  • PDB Chain ID : B

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P09012 282

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig85 61 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5DDR C 50 MET SD 4.14 Å van-der-waals C5' A 40 5DDRB00
5DDR C 19 LYS O 4.82 Å van-der-waals OP1 G 30 5DDRB00
5DDR B 101 GLN 3.2 Å stack G 22 5DDRB00
5DDR C 87 LYS CG 4.4 Å van-der-waals N1 C 39 5DDRB00
5DDR C 87 LYS CD 4.38 Å van-der-waals C2 C 39 5DDRB00

Complete list of contacts