5NRL200

Structural information

  • Experiment ID: Exp_5NRL
  • Experiment Type : EM
  • PubMed ID : 28530653
  • Ligand ID: Lig142
  • PDB ID : 5NRL
  • PDB Chain ID : 2

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P40567 111
Q99181 213

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig107 95 RNA
Lig142 1175 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5NRL Y 41 MET CB 2.72 Å van-der-waals OP2 G 1138 5NRL200
5NRL Y 37 GLU OE1 4.56 Å van-der-waals O2 U 1104 5NRL200
5NRL Y 105 LYS CB 4.51 Å van-der-waals N1 C 1107 5NRL200
5NRL Y 102 GLU OE1 4.35 Å van-der-waals C4 C 1107 5NRL200
5NRL Y 73 PHE CD1 4.77 Å van-der-waals C6 A 1108 5NRL200

Complete list of contacts