Lig142

Ligand information

  • Ligand ID: Lig142
  • Ligand Type : RNA
  • Ligand Length : 1175
  • Ligand Sequence : ACGAAUCUCUUUGCCUUUUGGCUUAGAUCAAGUGUAGUAUCUGUUCUUUUCAGUGUAACAACUGAAAUGACCUCAAUGAGGCUCAUUACCUUUUAAUUUGUUACAAUACACAUUUUUUGGCACCCAAAAUAAUAAAAUGGACGGGAAGAGACUUUUUAAGCAAGUUGUUUUCCGCUAAUGUCAGGUCUCACUACUUUUUGCUGCUAUUUUUCUUCGCUCAUGGUUUCUUCAUAAGGCGUUUUUAUGAUGGUUUUUCGAAAUUGGUUUUUGAGACGACGGUUGCUCAAGGUUAUUGUUUUUGUUUUCUUCUGGUUGUUUUCUAUUUUCUUUUUUUUAGCUUUCUGUUUCUCCCUUAGUUUGGCUUUUUGCUUCAUACUCUUCCCUGUCUUUCCGAGCCGUUUAUGUCCAACGCGGGAUUUGGUUUUUCUUUAUCGAUGGGAAGAAAUGGUGCUAUAGUAGGUUGGGAGAUAAUAUUUAUGGUAUGGGGUGCUAGUGCGGAUGGGGCGCUCUUAUUGUUGAUUUCUUCGCUCGUCUUCUUUUUCUGGUGGCGCUGCAAGAGGAAGUUUUUCGACUUUGUUAUGAUUUUUGGUUUGCAAGGAAAGGUGUCUUACGAUUCUUUUUUUGAUGUAAUAGGAUAAGCUUGCUUAUCCCCCAAGUAUCGGCCAAAGUUGUUGAUUUUCCUUUUGAAGUGUCCUCGGUUUGAGGGGGUGUAGGGUGGGGUUGGUCUACAAUAAGAGUGUUCCAUUGUUAACGUGCUGGCGUCUUUUACUAUAUUUUUUUUCCCAGUUUAUUUUGUGCUUAUUUUCUCAUUGAGGAGAAGGAGCUCUUCUCGCAGGAUAUAAAUGGAGGUUUGCUAAAGGGGAGGAGAUGUGUUUGUGAGAAUACUGCUGAGAGAGUUCUGGAAGAGAAAAAAAGGAGGCAAUGGAAGGCGUUUGCUGGGAAAAGAGAAGAGCCAUGACUGCAUCUGUUGUUUCAAGGCCAGUUUUAUUAACCGCCUAUGUCAUAGAGGCGUUUUUUUUGGAGGGAUUUGAAGAAUGCCGGCGGCAUCAAGAAACGGACUUGAUGGUUGACGCCUGUUUUUAAAGUUAGAGACGUCGCGACCCUCGCACUUGUGGAGUCGUUCUUGACUUUUACUUUGGUCGCUUGAUGUUUCUCUCGUCUUCCCGUUCGCUCUU

Available Structures for this Ligand- 18

Ligand Structurename PDB ID Chain ID
5GMKL00 5GMK L
5LJ3Z00 5LJ3 Z
5LJ5Z00 5LJ5 Z
5MQ0200 5MQ0 2
5NRL200 5NRL 2
5WSGL00 5WSG L
5Y88F00 5Y88 F
5YLZF00 5YLZ F
5ZWMH00 5ZWM H
6BK8200 6BK8 2
6EXN200 6EXN 2
6J6GL00 6J6G L
6J6HL00 6J6H L
6J6NL00 6J6N L
6J6QL00 6J6Q L
7B9V200 7B9V 2
7OQB200 7OQB 2
7OQE200 7OQE 2

Binding Information from Structures

Experiment ID RRM Structure RRM Entryename Experiment Type Ligand ID Contacts
Exp_5GMK 5GMKR01 Q12046_RRM1 EM Lig142 Contacts
Exp_5GMK 5GMKa01 P40567_RRM1 EM Lig142 Contacts
Exp_5LJ3 5LJ3M01 Q12046_RRM1 EM Lig142 Contacts
Exp_5LJ3 5LJ3Y01 P40567_RRM1 EM Lig142 Contacts
Exp_5LJ5 5LJ5M01 Q12046_RRM1 EM Lig142 Contacts
Exp_5LJ5 5LJ5Y01 P40567_RRM1 EM Lig142 Contacts
Exp_5MQ0 5MQ0Y01 P40567_RRM1 EM Lig142 Contacts
Exp_5NRL 5NRLR02 Q99181_RRM2 EM Lig142 Contacts
Exp_5NRL 5NRLY01 P40567_RRM1 EM Lig142 Contacts
Exp_5WSG 5WSGX01 P40567_RRM1 EM Lig142 Contacts
Exp_5Y88 5Y88p01 P40567_RRM1 EM Lig142 Contacts
Exp_5YLZ 5YLZp01 P40567_RRM1 EM Lig142 Contacts
Exp_5ZWM 5ZWM402 Q99181_RRM2 EM Lig142 Contacts
Exp_5ZWM 5ZWMp01 P40567_RRM1 EM Lig142 Contacts
Exp_6BK8 6BK8r01 P40567_RRM1 EM Lig142 Contacts
Exp_6EXN 6EXNY01 P40567_RRM1 EM Lig142 Contacts
Exp_6J6G 6J6GR01 Q12046_RRM1 EM Lig142 Contacts
Exp_6J6G 6J6Ga01 P40567_RRM1 EM Lig142 Contacts
Exp_6J6H 6J6HR01 Q12046_RRM1 EM Lig142 Contacts
Exp_6J6H 6J6Ha01 P40567_RRM1 EM Lig142 Contacts
Exp_6J6N 6J6NR01 Q12046_RRM1 EM Lig142 Contacts
Exp_6J6N 6J6Na01 P40567_RRM1 EM Lig142 Contacts
Exp_6J6Q 6J6QR01 Q12046_RRM1 EM Lig142 Contacts
Exp_6J6Q 6J6Qa01 P40567_RRM1 EM Lig142 Contacts
Exp_7B9V 7B9VM01 A0A6A5Q155_RRM1 EM Lig142 Contacts
Exp_7B9V 7B9VY01 A0A6A5Q318_RRM1 EM Lig142 Contacts
Exp_7OQB 7OQBR02 Q99181_RRM2 EM Lig142 Contacts
Exp_7OQB 7OQBY01 P40567_RRM1 EM Lig142 Contacts
Exp_7OQE 7OQER02 Q99181_RRM2 EM Lig142 Contacts
Exp_7OQE 7OQEY01 P40567_RRM1 EM Lig142 Contacts

RRM domains tested for Binding - 5 

RRM Entryname Sequence Range RRM Sequence
A0A6A5Q155_RRM1 149 - 206 KHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAMSNQTLLL
A0A6A5Q318_RRM1 29 - 103 TLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEF
P40567_RRM1 5 - 110 ARKKQRIDRDTHHTVAEPVTEAKNTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKT
Q12046_RRM1 149 - 206 KHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAMSNQTLLL
Q99181_RRM2 110 - 179 LFIKNLADSIDSDQLVKIFNKFGKLIREPEIFYLSNGKLKCAYVYFEDFEKADLAIKSLNNQLVANNRIT