5OPTE00

Structural information

  • Experiment ID: Exp_5OPT
  • Experiment Type : EM
  • PubMed ID : 29107485
  • Ligand ID: Lig58
  • PDB ID : 5OPT
  • PDB Chain ID : E

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
Q4DY32 257

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig58 2319 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5OPT h 177 ARG CZ 4.95 Å ionic P C 265 5OPTE00
5OPT h 181 TYR CZ 4.13 Å van-der-waals N3 A 281 5OPTE00
5OPT h 157 PHE CB 4.65 Å van-der-waals P G 230 5OPTE00
5OPT h 136 ALA CA 3.9 Å van-der-waals O2' C 814 5OPTE00
5OPT h 107 PHE CG 4.74 Å van-der-waals O2 C 814 5OPTE00

Complete list of contacts