Exp_5ZWO

Experiment information

  • Experiment ID: Exp_5ZWO
  • PubMed ID : 29794219
  • Experiment Type : EM
  • PDB ID : 5ZWO

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P40565 148
P40567 111
Q99181 213

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
P40565_RRM1 33 - 103 5ZWOX01
P40567_RRM1 5 - 110 5ZWOp01
Q99181_RRM1 11 - 82 5ZWO401
Q99181_RRM2 110 - 179 5ZWO402

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_5ZWO 5ZWO401 EM Lig33 Contacts
Exp_5ZWO 5ZWO402 EM Lig173 Contacts
Exp_5ZWO 5ZWOX01 EM Lig33 Contacts
Exp_5ZWO 5ZWOp01 EM Lig173 Contacts

Ligands tested for Binding - 2 

Ligand ID Ligand Type Ligand Sequence
Lig173 RNA ACGAAUCUCUUUGCCUUUUGGCUUAGAUCAAGUGUAGUAUCUGUUCUUUUCAGUGUAACAACUGAAAUGACCUCAAUGAGGCUCAUUACCUUUUAAUUUGUUACAAUACACAUUUUUUGGCACCCAAAAUAAUAAAAUGGACGGGAAGAGACUUUUUAAGCAAGACGUUUUCCGCUAAUGACACCUCGCACGAGUCGUUCUUGCUAUCUUUGGUCGCUUGAUGUUUCUUCUUAACCCGUUCUUAUGAUGGUUUUUCGAAAUUGGUUUUUGAGACGACGGUUGCUCAAGGUUAUUGUUUUUGUUUUCUUCUGGUUGUUUUCUAUUUUCUUUUUUUUAGCUUUCUGUUUCUCCCUUAGUUUGGCUUUUUGCUUCAUACUCUUCCCUGUCUUUCCGAGCCGUUUAUGUCCAACGCGGGAUUUGGUUUUUCUUUAUCGAUGGGAAGAAAUGGUGCUAUAGUAGGUUGGGAGAUAAUAUUUAUGGUAUGGGGUGCUAGUGCGGAUGGGGCGCUCUUAUUGUUGAUUUCUUCGCUCGUCUUCUUUUUCUGGUGGCGCUGCAAGAGGAAGUUUUUCGACUUUGUUAUGAUUUUUGGUUUGCAAGGAAAGGUGUCUUACGAUUCUUUUUUUGAUGUAAUAGGAUAAGCUUGCUUAUCCCCCAAGUAUCGGCCAAAGUUGUUGAUUUUCCUUUUGAAGUGUCCUCGGUUUGAGGGGGUGUAGGGUGGGGUUGGUCUACAAUAAGAGUGUUCCAUUGUUAACGUGCUGGCGUCUUUUACUAUAUUUUUUUUCCCAGUUUAUUUUGUGCUUAUUUUCUCAUUGAGGAGAAGGAGCUCUUCUCGCAGGAUAUAAAUGGAGGUUUGCUAAAGGGGAGGAGAUGUGUUUGUGAGAAUACUGCUGAGAGAGUUCUGGAAGAGAAAAAAAGGAGGCAAUGGAAGGCGUUUGCUGGGAAAAGAGAAGAGCCAUGACUGCAUCUGUUGUUUCAAGGCCAGUUUUAUUAACCGCCUAUGUCAUAGAGGCGUUUUUUUUGGAGGGAUUUGAAGAAUGCCGGCGGCAUCAAGAAACGGACUUGAUGGUUGACGCCUGUUUUUAAAGUUAGAGACGUCGCGACCCUCGCACUUGUGGAGUCGUUCUUGACUUUUACUUUGGUCGCUUGAUGUUUCUCUCGUCUUCCCGUUCGCUCUU
Lig33 RNA AAAAAAAAUUUUUUUUAAAAAAAAAAAACUAGAUACUAACACAUUUAAUUUUUUUUUGUU

Ligand Structures from this Experiment - 2 

Ligand Structurename PDB ID Chain ID Ligand ID
5ZWOG00 5ZWO G Lig33
5ZWOH00 5ZWO H Lig173