5YLZD00

Structural information

  • Experiment ID: Exp_5YLZ
  • Experiment Type : EM
  • PubMed ID : 29153833
  • Ligand ID: Lig41
  • PDB ID : 5YLZ
  • PDB Chain ID : D

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P40567 111
Q12046 339

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig142 1175 RNA
Lig41 112 RNA
Lig90 369 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5YLZ N 18 LEU CD1 3.63 Å van-der-waals C2 A 35 5YLZD00
5YLZ N 18 LEU CD1 3.95 Å van-der-waals N3 A 35 5YLZD00
5YLZ N 18 LEU CD1 4.61 Å van-der-waals N1 A 35 5YLZD00
5YLZ N 18 LEU CD2 3.54 Å van-der-waals C2 A 35 5YLZD00
5YLZ N 18 LEU CD2 4.03 Å van-der-waals N3 A 35 5YLZD00

Complete list of contacts