5YLZE00

Structural information

  • Experiment ID: Exp_5YLZ
  • Experiment Type : EM
  • PubMed ID : 29153833
  • Ligand ID: Lig90
  • PDB ID : 5YLZ
  • PDB Chain ID : E

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P40567 111
Q12046 339

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig41 112 RNA
Lig90 369 RNA
Lig142 1175 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5YLZ N 41 PHE CD2 4.93 Å van-der-waals OP2 U 9 5YLZE00
5YLZ N 41 PHE CE2 3.83 Å van-der-waals OP2 U 9 5YLZE00
5YLZ N 41 PHE CZ 4.21 Å van-der-waals OP2 U 9 5YLZE00
5YLZ N 44 ASN CA 4.73 Å van-der-waals N1 A 11 5YLZE00
5YLZ N 44 ASN CB 3.5 Å van-der-waals N1 A 11 5YLZE00

Complete list of contacts