Exp_6FF4

Experiment information

  • Experiment ID: Exp_6FF4
  • PubMed ID : 29361316
  • Experiment Type : EM
  • PDB ID : 6FF4

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
Q9NW64 420
Q9Y388 322
Q9Y3B4 125

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
Q9NW64_RRM1 234 - 299 6FF4P01
Q9Y388_RRM1 38 - 108 6FF4101
Q9Y3B4_RRM1 21 - 88 6FF4z01

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_6FF4 6FF4101 EM No contacts
Exp_6FF4 6FF4P01 EM No contacts
Exp_6FF4 6FF4z01 EM No contacts

Ligands tested for Binding - 2 

Ligand ID Ligand Type Ligand Sequence
Lig149 RNA GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUU
Lig217 RNA GAAUACAAGCUCAUCCGAUAUCCGUACACCAUCAGGGUACGAGCUAGCCCAUGGCGUACACCAUCAGGGUACGACUAGUAGAUCUCGUACACCAUCAGGGUACGGAAUUCUCUAGAGUCGAGGAGGACAUCUCAGCAAAAGAGAAGCUGCUGCGGGCGUCGGAGGACGAGCGGGACCGGGUGCUGGAGGAGCUGCACAAGGCAGAGGACAGCCUGCUGGCUGCCGACGAGACCGCCGCCAAGGUAUGUAUCAAGCUUACAAGACAGCUUUAAGGAGACCAAUAGAAACUGGGCAUGUGGAGACAGAGAAGACUCUUGGCCUCGAGAAACCUGUAACUGGAAUGUGUGUGGAGUGUGACUGAUAGAACACUACCUGAUUCUUAUGUAUUUACUGACCUGUGUUUUUUUGCUACUUUUUUUCUUUUCUCCCCUUCCCCUUUCCCUAUUUUUUUUCUUGCCCUGAUCCGGAAUUUGGAUCC

Ligand Structures from this Experiment - 2 

Ligand Structurename PDB ID Chain ID Ligand ID
6FF4600 6FF4 6 Lig149
6FF4Z00 6FF4 Z Lig217