Cytotoxic granule associated RNA binding protein TIA1

Protein information

  • Protein ID: P31483
  • Protein Name : Cytotoxic granule associated RNA binding protein TIA1
  • Gene : TIA1
  • Organism : Homo sapiens
  • Status : reviewed
  • Function : RNA-binding protein involved in the regulation of alternative pre-RNA splicing and mRNA translation by binding to uridine-rich (U-rich) RNA sequences (PubMed:8576255 PubMed:11106748 PubMed:12486009 PubMed:17488725). Binds to U-rich sequences immediately downstream from a 5' splice sites in a uridine-rich small nuclear ribonucleoprotein (U snRNP)-dependent fashion thereby modulating alternative pre-RNA splicing (PubMed:11106748 PubMed:8576255). Preferably binds to the U-rich IAS1 sequence in a U1 snRNP-dependent manner; this binding is optimal if a 5' splice site is adjacent to IAS1 (By similarity). Activates the use of heterologous 5' splice sites; the activation depends on the intron sequence downstream from the 5' splice site with a preference for a downstream U-rich sequence (PubMed:11106748). By interacting with SNRPC/U1-C promotes recruitment and binding of spliceosomal U1 snRNP to 5' splice sites followed by U-rich sequences thereby facilitating atypical 5' splice site recognition by U1 snRNP (PubMed:11106748 PubMed:12486009 PubMed:17488725). Activates splicing of alternative exons with weak 5' splice sites followed by a U-rich stretch on its own pre-mRNA and on TIAR mRNA (By similarity). Acts as a modulator of alternative splicing for the apoptotic FAS receptor thereby promoting apoptosis (PubMed:11106748 PubMed:1934064 PubMed:17488725). Binds to the 5' splice site region of FAS intron 5 to promote accumulation of transcripts that include exon 6 at the expense of transcripts in which exon 6 is skipped thereby leading to the transcription of a membrane-bound apoptotic FAS receptor which promotes apoptosis (PubMed:11106748 PubMed:1934064 PubMed:17488725). Binds to a conserved AU-rich cis element in COL2A1 intron 2 and modulates alternative splicing of COL2A1 exon 2 (PubMed:17580305). Also binds to the equivalent AT-rich element in COL2A1 genomic DNA and may thereby be involved in the regulation of transcription (PubMed:17580305). Binds specifically to a polypyrimidine-rich controlling element (PCE) located between the weak 5' splice site and the intronic splicing silencer of CFTR mRNA to promote exon 9 inclusion thereby antagonizing PTB1 and its role in exon skipping of CFTR exon 9 (PubMed:14966131). Involved in the repression of mRNA translation by binding to AU-rich elements (AREs) located in mRNA 3' untranslated regions (3' UTRs) including target ARE-bearing mRNAs encoding TNF and PTGS2 (By similarity). Also participates in the cellular response to environmental stress by acting downstream of the stress-induced phosphorylation of EIF2S1/EIF2A to promote the recruitment of untranslated mRNAs to cytoplasmic stress granules (SGs) leading to stress-induced translational arrest (PubMed:10613902). Formation and recruitment to SGs is regulated by Zn(2+) (By similarity). Possesses nucleolytic activity against cytotoxic lymphocyte target cells (PubMed:1934064).

Protein Sequence

  • MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAPWMGPNYGVQPPQGQNGSMLPNQPSGYRVAGYETQ

RRM domains in this Protein - 3 

RRM Entryname RRM Sequence range Pfam ID
P31483_RRM1 9 - 77 PF00076
P31483_RRM2 108 - 178 PF00076
P31483_RRM3 216 - 280 PF00076

RRM domain Linkers in this Protein - 2 

Linker Name Linker Sequence range
P31483_linker1 78 - 107
P31483_linker2 179 - 215

Experiments retrieved for this Protein - 26 

Experiment ID Experiment Type PubMed ID
Exp_216 ITC 24682828
Exp_217 ITC 24682828
Exp_218 ITC 24682828
Exp_219 ITC 24682828
Exp_220 ITC 24682828
Exp_221 ITC 24682828
Exp_222 ITC 24682828
Exp_223 Fluorescence polarization 28184449
Exp_224 Fluorescence polarization 28184449
Exp_225 Fluorescence polarization 28184449
Exp_226 Fluorescence polarization 28184449
Exp_227 Fluorescence polarization 28184449
Exp_228 Fluorescence polarization 28184449
Exp_308 CD Spectroscopy 23902765
Exp_309 CD Spectroscopy 23902765
Exp_359 Fluorescence polarization 28184449
Exp_360 Fluorescence polarization 28184449
Exp_361 Fluorescence polarization 28184449
Exp_362 Fluorescence polarization 28184449
Exp_363 Fluorescence polarization 28184449
Exp_2MJN NMR 24682828
Exp_3BS9 X-ray Diffraction 18201561
Exp_5ITH X-ray Diffraction 28184449
Exp_5O2V NMR 28636238
Exp_5O3J X-ray Diffraction 28636238
Exp_6ELD X-ray Diffraction

Ligands tested for Binding - 24 

Ligand ID Ligand Type Ligand Sequence
Lig325 RNA UUUUUUUUUUUUUUU
Lig15 RNA UUUUUUUUU
Lig193 DNA ACTCCTTTTT
Lig204 RNA UUC
Lig226 RNA AUUUAUUUAUUUAUUUAUUUAUUU
Lig255 RNA GUUAUAUUCUCCUUUC
Lig285 DNA ATTCTCCTTT
Lig286 RNA UUCUCCUUUC
Lig304 DNA TTTTTACTCC
Lig307 RNA AUUCUCCUUU
Lig319 RNA UUUUUACUCC
Lig325 RNA UUUUUUUUUUUUUUU
Lig339 RNA ACUCCUUUUU
Lig15 RNA UUUUUUUUU
Lig193 DNA ACTCCTTTTT
Lig226 RNA AUUUAUUUAUUUAUUUAUUUAUUU
Lig255 RNA GUUAUAUUCUCCUUUC
Lig285 DNA ATTCTCCTTT
Lig286 RNA UUCUCCUUUC
Lig304 DNA TTTTTACTCC
Lig307 RNA AUUCUCCUUU
Lig319 RNA UUUUUACUCC
Lig325 RNA UUUUUUUUUUUUUUU
Lig339 RNA ACUCCUUUUU