4PKDV00

Structural information

  • Experiment ID: Exp_4PKD
  • Experiment Type : X-ray Diffraction
  • PubMed ID : 25555158
  • Ligand ID: Lig179
  • PDB ID : 4PKD
  • PDB Chain ID : V

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08621 437
Q06AA4 282

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig179 55 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
4PKD B 237 ARG CZ 4.67 Å van-der-waals O4' G 93 4PKDV00
4PKD B 173 ALA CB 4.77 Å van-der-waals C1' U 95 4PKDV00
4PKD B 44 LEU CD1 4.55 Å van-der-waals C1' C 71 4PKDV00
4PKD B 256 ARG NH2 3.58 Å van-der-waals N2 G 99 4PKDV00
4PKD B 51 MET CE 4.75 Å van-der-waals C2' A 70 4PKDV00

Complete list of contacts