5GM6E00

Structural information

  • Experiment ID: Exp_5GM6
  • Experiment Type : EM
  • PubMed ID : 27445306
  • Ligand ID: Lig41
  • PDB ID : 5GM6
  • PDB Chain ID : E

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P40565 148
Q12046 339
Q99181 213

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig105 25 RNA
Lig197 61 RNA
Lig41 112 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5GM6 R 75 PHE CZ 3.68 Å van-der-waals O2' A 35 5GM6E00
5GM6 R 75 PHE CZ 4.07 Å van-der-waals C1' A 35 5GM6E00
5GM6 R 117 PHE CZ 4.47 Å van-der-waals C1' G 39 5GM6E00
5GM6 R 34 TYR CD2 3.75 Å van-der-waals C4 A 41 5GM6E00
5GM6 R 81 CYS SG 4.85 Å van-der-waals C6 A 35 5GM6E00

Complete list of contacts