5XJCF00

Structural information

  • Experiment ID: Exp_5XJC
  • Experiment Type : EM
  • PubMed ID : 28502770
  • Ligand ID: Lig149
  • PDB ID : 5XJC
  • PDB Chain ID : F

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9Y5S9 174

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig112 275 RNA
Lig149 107 RNA
Lig80 188 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5XJC O 35 ARG CZ 3.66 Å ionic OP1 U 23 5XJCF00
5XJC O 35 ARG CZ 3.74 Å ionic OP2 U 23 5XJCF00
5XJC O 35 ARG CZ 4.2 Å ionic P U 23 5XJCF00
5XJC O 35 ARG CZ 4.35 Å van-der-waals O2' A 22 5XJCF00
5XJC O 35 ARG NE 4.94 Å ionic OP1 U 23 5XJCF00

Complete list of contacts