Lig80

Ligand information

  • Ligand ID: Lig80
  • Ligand Type : RNA
  • Ligand Length : 188
  • Ligand Sequence : AUCGCUUCUCGGCCUUUUGGCUAAGAUCAAGUGUAGUAUCUGUUCUUAUCAGUUUAAUAUCUGAUACGUCCUCUAUCCGAGGACAAUAUAUUAAAUGGAUUUUUGGAGCAGGGAGAUGGAAUAGGAGCUUGCUCCGUCCACUCCACGCAUCGACCUGGUAUUGCAGUACCUCCAGGAACGGUGCACCC

Available Structures for this Ligand- 16

Ligand Structurename PDB ID Chain ID
5MQF200 5MQF 2
5O9Z200 5O9Z 2
5XJCH00 5XJC H
5YZGH00 5YZG H
5Z56H00 5Z56 H
5Z57H00 5Z57 H
5Z58H00 5Z58 H
6AH0H00 6AH0 H
6AHDH00 6AHD H
6ICZH00 6ICZ H
6ID0H00 6ID0 H
6ID1H00 6ID1 H
6Y53200 6Y53 2
6Y5Q200 6Y5Q 2
7ABG200 7ABG 2
7ABI200 7ABI 2

Binding Information from Structures

Experiment ID RRM Structure RRM Entryename Experiment Type Ligand ID Contacts
Exp_5MQF 5MQFX01 P08579_RRM1 EM Lig80 Contacts
Exp_5MQF 5MQFo01 Q9UNP9_RRM1 EM Lig80 Contacts
Exp_5O9Z 5O9Z101 P08579_RRM1 EM Lig80 Contacts
Exp_5XJC 5XJCp01 P08579_RRM1 EM Lig80 Contacts
Exp_5YZG 5YZGp01 P08579_RRM1 EM Lig80 Contacts
Exp_5Z56 5Z56p01 P08579_RRM1 EM Lig80 Contacts
Exp_5Z57 5Z57p01 P08579_RRM1 EM Lig80 Contacts
Exp_5Z58 5Z58p01 P08579_RRM1 EM Lig80 Contacts
Exp_6AH0 6AH0p01 P08579_RRM1 EM Lig80 Contacts
Exp_6AHD 6AHDp01 P08579_RRM1 EM Lig80 Contacts
Exp_6ICZ 6ICZp01 P08579_RRM1 EM Lig80 Contacts
Exp_6ICZ 6ICZy01 Q9UNP9_RRM1 EM Lig80 Contacts
Exp_6ID0 6ID0p01 P08579_RRM1 EM Lig80 Contacts
Exp_6ID0 6ID0y01 Q9UNP9_RRM1 EM Lig80 Contacts
Exp_6ID1 6ID1p01 P08579_RRM1 EM Lig80 Contacts
Exp_6Y53 6Y53b01 P08579_RRM1 EM Lig80 Contacts
Exp_6Y5Q 6Y5Qb01 P08579_RRM1 EM Lig80 Contacts
Exp_6Y5Q 6Y5Qq02 O43719_RRM2 EM Lig80 Contacts
Exp_7ABG 7ABGB01 P08579_RRM1 EM Lig80 Contacts
Exp_7ABI 7ABIB01 P08579_RRM1 EM Lig80 Contacts

RRM domains tested for Binding - 3 

RRM Entryname Sequence Range RRM Sequence
O43719_RRM2 287 - 343 IREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQIT
P08579_RRM1 9 - 80 IYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMR
Q9UNP9_RRM1 8 - 78 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIR