Exp_7ABI

Experiment information

  • Experiment ID: Exp_7ABI
  • PubMed ID : 33243851
  • Experiment Type : EM
  • PDB ID : 7ABI

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q15427 424
Q9NW64 420
Q9UNP9 301
Q9Y388 322
Q9Y3B4 125

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
P08579_RRM1 9 - 80 7ABIB01
P08579_RRM2 153 - 219 7ABIB02
Q15427_RRM1 15 - 85 7ABIw01
Q9NW64_RRM1 234 - 299 7ABIP01
Q9UNP9_RRM1 8 - 78 7ABIo01
Q9Y388_RRM1 38 - 108 7ABI101
Q9Y3B4_RRM1 21 - 88 7ABIz01

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_7ABI 7ABI101 EM No contacts
Exp_7ABI 7ABIB01 EM Lig80 Contacts
Exp_7ABI 7ABIB02 EM No contacts
Exp_7ABI 7ABIP01 EM No contacts
Exp_7ABI 7ABIo01 EM No contacts
Exp_7ABI 7ABIw01 EM No contacts
Exp_7ABI 7ABIz01 EM No contacts

Ligands tested for Binding - 2 

Ligand ID Ligand Type Ligand Sequence
Lig78 RNA GGGAGACGGAAUUCGAGCUCGCCCACUCUUGGAUCGGAAACCCGUCGGCCUCCGAACGGUAAGAGCCUAGCAUGUAGAACUGGUUACCUGCAGCCCAAGCUUGCUGCACGUCUAGGGCGCAGUAGUCCAGGGUUUCCUUGAUGAUGUCAUACUUAUCCUGUCCCUUUUUUUUCCACAGCUCGCGGUUGAGGACAAACUCUUCGCGGUCUUUCCAGUGGGGAUCCAAUAUCCGUACACCAUCAGGGUACGAGCUAGCCCAUGGCGUACACCAUCAGGGUACGACUAGUAGAUCUCGUACACCAUCAGGGUACGGAAUUCUCUAGA
Lig80 RNA AUCGCUUCUCGGCCUUUUGGCUAAGAUCAAGUGUAGUAUCUGUUCUUAUCAGUUUAAUAUCUGAUACGUCCUCUAUCCGAGGACAAUAUAUUAAAUGGAUUUUUGGAGCAGGGAGAUGGAAUAGGAGCUUGCUCCGUCCACUCCACGCAUCGACCUGGUAUUGCAGUACCUCCAGGAACGGUGCACCC

Ligand Structures from this Experiment - 3 

Ligand Structurename PDB ID Chain ID Ligand ID
7ABI200 7ABI 2 Lig80
7ABI600 7ABI 6 Lig89
7ABIZ00 7ABI Z Lig78