Exp_5Z57

Experiment information

  • Experiment ID: Exp_5Z57
  • PubMed ID : 29360106
  • Experiment Type : EM
  • PDB ID : 5Z57

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q15427 424
Q9NW64 420
Q9UNP9 301
Q9Y388 322
Q9Y3B4 125

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
P08579_RRM1 9 - 80 5Z57p01
P08579_RRM2 153 - 219 5Z57p02
Q15427_RRM1 15 - 85 5Z57401
Q9NW64_RRM1 234 - 299 5Z57O01
Q9UNP9_RRM1 8 - 78 5Z57y01
Q9Y388_RRM1 38 - 108 5Z57Y01
Q9Y3B4_RRM1 21 - 88 5Z57501

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_5Z57 5Z57401 EM No contacts
Exp_5Z57 5Z57501 EM No contacts
Exp_5Z57 5Z57O01 EM Lig91 Contacts
Exp_5Z57 5Z57Y01 EM Lig91 Contacts
Exp_5Z57 5Z57p01 EM Lig80 Contacts
Exp_5Z57 5Z57p02 EM No contacts
Exp_5Z57 5Z57y01 EM No contacts

Ligands tested for Binding - 3 

Ligand ID Ligand Type Ligand Sequence
Lig80 RNA AUCGCUUCUCGGCCUUUUGGCUAAGAUCAAGUGUAGUAUCUGUUCUUAUCAGUUUAAUAUCUGAUACGUCCUCUAUCCGAGGACAAUAUAUUAAAUGGAUUUUUGGAGCAGGGAGAUGGAAUAGGAGCUUGCUCCGUCCACUCCACGCAUCGACCUGGUAUUGCAGUACCUCCAGGAACGGUGCACCC
Lig91 RNA GGGAAUACACGGAAUUCGAGCUCGCCCACUCUUGGAUCGGAAACCCGUCGGCCUCCGAACGGUAAGAGCCUAGCAUGUAGAACUGGUUACCUGCAGCCCAAGCUUGCGUACACCAUCAGGGUACGUACUAGUACGUACACCAUCAGGGUACGGCUGCACGUCUAGGGCGCAGUAGUCCAGGGUUUCCUUGAUGAUGUCAUACUUAUCCUGUCCCUUUUUUUUCCACGGCUCGCGGUUGAGGACAAACUCUUCGCGGUCUUUCCAGUGGGGAUCC
Lig149 RNA GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUU

Ligand Structures from this Experiment - 3 

Ligand Structurename PDB ID Chain ID Ligand ID
5Z57F00 5Z57 F Lig149
5Z57G00 5Z57 G Lig91
5Z57H00 5Z57 H Lig80