5Z57F00

Structural information

  • Experiment ID: Exp_5Z57
  • Experiment Type : EM
  • PubMed ID : 29360106
  • Ligand ID: Lig149
  • PDB ID : 5Z57
  • PDB Chain ID : F

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q15427 424
Q9NW64 420
Q9UNP9 301
Q9Y388 322
Q9Y3B4 125

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig149 107 RNA
Lig80 188 RNA
Lig91 274 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5Z57 O 35 ARG CZ 3.53 Å ionic OP2 U 23 5Z57F00
5Z57 O 35 ARG CZ 3.84 Å van-der-waals O2' A 22 5Z57F00
5Z57 O 35 ARG CZ 3.86 Å ionic OP1 U 23 5Z57F00
5Z57 O 35 ARG CZ 4.18 Å ionic P U 23 5Z57F00
5Z57 O 35 ARG NE 4.84 Å ionic OP2 U 23 5Z57F00

Complete list of contacts