Exp_5Z58

Experiment information

  • Experiment ID: Exp_5Z58
  • PubMed ID : 29360106
  • Experiment Type : EM
  • PDB ID : 5Z58

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q15427 424
Q9Y388 322
Q9Y3B4 125

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
P08579_RRM1 9 - 80 5Z58p01
P08579_RRM2 153 - 219 5Z58p02
Q15427_RRM1 15 - 85 5Z58401
Q9Y388_RRM1 38 - 108 5Z58Y01
Q9Y3B4_RRM1 21 - 88 5Z58501

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_5Z58 5Z58401 EM No contacts
Exp_5Z58 5Z58501 EM No contacts
Exp_5Z58 5Z58Y01 EM Lig91 Contacts
Exp_5Z58 5Z58p01 EM Lig80 Contacts
Exp_5Z58 5Z58p02 EM No contacts

Ligands tested for Binding - 2 

Ligand ID Ligand Type Ligand Sequence
Lig80 RNA AUCGCUUCUCGGCCUUUUGGCUAAGAUCAAGUGUAGUAUCUGUUCUUAUCAGUUUAAUAUCUGAUACGUCCUCUAUCCGAGGACAAUAUAUUAAAUGGAUUUUUGGAGCAGGGAGAUGGAAUAGGAGCUUGCUCCGUCCACUCCACGCAUCGACCUGGUAUUGCAGUACCUCCAGGAACGGUGCACCC
Lig91 RNA GGGAAUACACGGAAUUCGAGCUCGCCCACUCUUGGAUCGGAAACCCGUCGGCCUCCGAACGGUAAGAGCCUAGCAUGUAGAACUGGUUACCUGCAGCCCAAGCUUGCGUACACCAUCAGGGUACGUACUAGUACGUACACCAUCAGGGUACGGCUGCACGUCUAGGGCGCAGUAGUCCAGGGUUUCCUUGAUGAUGUCAUACUUAUCCUGUCCCUUUUUUUUCCACGGCUCGCGGUUGAGGACAAACUCUUCGCGGUCUUUCCAGUGGGGAUCC

Ligand Structures from this Experiment - 2 

Ligand Structurename PDB ID Chain ID Ligand ID
5Z58G00 5Z58 G Lig91
5Z58H00 5Z58 H Lig80