Exp_5MQF

Experiment information

  • Experiment ID: Exp_5MQF
  • PubMed ID : 28076346
  • Experiment Type : EM
  • PDB ID : 5MQF

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9UNP9 301

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
P08579_RRM1 9 - 80 5MQFX01
Q9NW64_RRM1 234 - 299 5MQFP01
Q9UNP9_RRM1 8 - 78 5MQFo01

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_5MQF 5MQFP01 EM No contacts
Exp_5MQF 5MQFX01 EM Lig80 Contacts
Exp_5MQF 5MQFo01 EM Lig80 Contacts

Ligands tested for Binding - 2 

Ligand ID Ligand Type Ligand Sequence
Lig80 RNA AUCGCUUCUCGGCCUUUUGGCUAAGAUCAAGUGUAGUAUCUGUUCUUAUCAGUUUAAUAUCUGAUACGUCCUCUAUCCGAGGACAAUAUAUUAAAUGGAUUUUUGGAGCAGGGAGAUGGAAUAGGAGCUUGCUCCGUCCACUCCACGCAUCGACCUGGUAUUGCAGUACCUCCAGGAACGGUGCACCC
Lig89 RNA GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUU

Ligand Structures from this Experiment - 2 

Ligand Structurename PDB ID Chain ID Ligand ID
5MQF200 5MQF 2 Lig80
5MQF600 5MQF 6 Lig89