5XJCH00

Structural information

  • Experiment ID: Exp_5XJC
  • Experiment Type : EM
  • PubMed ID : 28502770
  • Ligand ID: Lig80
  • PDB ID : 5XJC
  • PDB Chain ID : H

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9Y5S9 174

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig112 275 RNA
Lig149 107 RNA
Lig80 188 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5XJC p 16 ASP OD2 3.19 Å van-der-waals N6 A 160 5XJCH00
5XJC p 10 TYR 3.69 Å stack C 164 5XJCH00
5XJC p 41 VAL CG2 4.47 Å van-der-waals N9 G 166 5XJCH00
5XJC p 10 TYR CD1 4.49 Å van-der-waals N3 C 164 5XJCH00
5XJC p 53 PHE CE2 4.54 Å van-der-waals C2 A 165 5XJCH00

Complete list of contacts