5XJCG00

Structural information

  • Experiment ID: Exp_5XJC
  • Experiment Type : EM
  • PubMed ID : 28502770
  • Ligand ID: Lig112
  • PDB ID : 5XJC
  • PDB Chain ID : G

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9Y5S9 174

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig112 275 RNA
Lig149 107 RNA
Lig80 188 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5XJC O 43 LYS NZ 4.66 Å ionic OP2 G 16 5XJCG00
5XJC O 46 LYS CD 3.79 Å van-der-waals O2 U 17 5XJCG00
5XJC O 46 LYS CD 4.28 Å van-der-waals O2' U 17 5XJCG00
5XJC O 46 LYS CD 4.96 Å van-der-waals C1' U 17 5XJCG00
5XJC O 46 LYS CD 4.96 Å van-der-waals C2 U 17 5XJCG00

Complete list of contacts