5Y88D00
- Experiment ID:
Exp_5Y88
- Experiment Type : EM
- PubMed ID : 28919079
- Ligand ID:
Lig41
- PDB ID : 5Y88
- PDB Chain ID : D
UniProt ID |
Protein Length |
Mutated Instance |
P40567 |
111 |
|
Q12046 |
339 |
|
PDB ID |
Amino Acid Chain |
Amino Acid Position |
Amino Acid |
Amino Acid Atom |
Contact Distance |
Interaction Type |
Nucleotide Atom |
Nucleotide |
Nucleotide Position |
Ligand Structurename |
5Y88 |
N |
196 |
LYS |
NZ |
2.35 Å |
hbond |
O2 |
U |
38 |
5Y88D00 |
5Y88 |
N |
40 |
GLY |
C |
4.2 Å |
van-der-waals |
C2 |
A |
44 |
5Y88D00 |
5Y88 |
N |
75 |
PHE |
CD2 |
4.42 Å |
van-der-waals |
N1 |
A |
35 |
5Y88D00 |
5Y88 |
N |
196 |
LYS |
NZ |
4.75 Å |
van-der-waals |
O2' |
U |
38 |
5Y88D00 |
5Y88 |
N |
200 |
SER |
OG |
3.48 Å |
van-der-waals |
C5 |
U |
38 |
5Y88D00 |