6QDV600

Structural information

  • Experiment ID: Exp_6QDV
  • Experiment Type : EM
  • PubMed ID : 30705154
  • Ligand ID: Lig89
  • PDB ID : 6QDV
  • PDB Chain ID : 6

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9Y5S9 174

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig18 189 RNA
Lig35 113 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
6QDV M 35 ARG CZ 3.35 Å ionic OP1 U 23 6QDV600
6QDV M 35 ARG CZ 3.48 Å ionic OP2 U 23 6QDV600
6QDV M 35 ARG CZ 3.83 Å van-der-waals O2' A 22 6QDV600
6QDV M 35 ARG CZ 3.89 Å ionic P U 23 6QDV600
6QDV M 35 ARG CZ 4.81 Å van-der-waals C2' A 22 6QDV600

Complete list of contacts