Exp_6QDV

Experiment information

  • Experiment ID: Exp_6QDV
  • PubMed ID : 30705154
  • Experiment Type : EM
  • PDB ID : 6QDV

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9Y5S9 174

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
P08579_RRM1 9 - 80 6QDVY01
Q9NW64_RRM1 234 - 299 6QDVM01
Q9Y5S9_RRM1 75 - 145 6QDV801

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_6QDV 6QDV801 EM No contacts
Exp_6QDV 6QDVM01 EM No contacts
Exp_6QDV 6QDVY01 EM Lig18 Contacts

Ligands tested for Binding - 2 

Ligand ID Ligand Type Ligand Sequence
Lig18 RNA AUCGCUUCUCGGCCUUUUGGCUAAGAUCAAGUGUAGUAUCUGUUCUUAUCAGUUUAAUAUCUGAUACGUCCUCUAUCCGAGGACAAUAUAUUAAAAGAUUUUUGGAACUCAGGGAGAUGGAAUAGGAGCUUGCUCCGUCCACUCCACGCAUCGACCUGGUAUUGCAGUACCUCCAGGAACGGUGCACCC
Lig35 RNA GUAAGAGCCUAGCAUGUAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGAUGAUGUCAUACUUAUCCUNNNNNNNNNCAG

Ligand Structures from this Experiment - 3 

Ligand Structurename PDB ID Chain ID Ligand ID
6QDV200 6QDV 2 Lig18
6QDV600 6QDV 6 Lig89
6QDVI00 6QDV I Lig35