6QDVI00

Structural information

  • Experiment ID: Exp_6QDV
  • Experiment Type : EM
  • PubMed ID : 30705154
  • Ligand ID: Lig35
  • PDB ID : 6QDV
  • PDB Chain ID : I

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9Y5S9 174

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig18 189 RNA
Lig35 113 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
6QDV M 163 HIS CE1 3.15 Å van-der-waals O5' U 17 6QDVI00
6QDV M 198 ILE CA 4.88 Å van-der-waals O4 U 17 6QDVI00
6QDV M 152 ARG CB 4.94 Å van-der-waals N1 A 21 6QDVI00
6QDV M 187 THR OG1 3.96 Å van-der-waals N7 A 20 6QDVI00
6QDV M 69 GLU CD 4.05 Å van-der-waals C2' U 17 6QDVI00

Complete list of contacts