Exp_7A5P

Experiment information

  • Experiment ID: Exp_7A5P
  • PubMed ID : 33007253
  • Experiment Type : EM
  • PDB ID : 7A5P

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9UNP9 301
Q9Y5S9 174

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
P08579_RRM1 9 - 80 7A5PX01
Q9NW64_RRM1 234 - 299 7A5PP01
Q9UNP9_RRM1 8 - 78 7A5Po01
Q9Y5S9_RRM1 75 - 145 7A5Pw01

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_7A5P 7A5PP01 EM Lig48 Contacts
Exp_7A5P 7A5PX01 EM Lig27 Contacts
Exp_7A5P 7A5Po01 EM Lig48 Contacts
Exp_7A5P 7A5Pw01 EM No contacts

Ligands tested for Binding - 2 

Ligand ID Ligand Type Ligand Sequence
Lig27 RNA AACGGCGGAGGCCACGCCCUCUGUGAAAGGGCGGGGCAUGCAAAUUCGAAAUGAAAGCCCGGGAACGCCGGAAGAAGCACGGGUGUAAGAUUUCCCUUUUCAAAGGCGGAGAAUAAGAAAUCAGCCCGAGAGUGUAAGGGCGUCAAUAGCGCUGUGGACGAGACAGAGGGAAUGGGGCAAGGAGCGAGGCUGGGGCUCUCACCGCGACUUGAAUGUGGAUGAGAGUGGGACGGUGACGGCGGGCGCGAAGGCGAGCGCAUCGCUUCUCGGCCUUUUGGCUAAGAUCAAGUGUAGUAUCUGUUCUUAUCAGUUUAAUAUCUGAUACGUCCUCUAUCCGAGGACAAUAUAUUAAAUGGAUUUUUGGAGCAGGGAGAUGGAAUAGGAGCUUGCUCCGUCCACUCCACGCAUCGACCUGGUAUUGCAGUACCUCCAGGAACGGUGCACCCCCUCCGGGGUACAACGUGUUUCCUAAAAGUAGAGGGAGGUGAGAGACGGUAGCACCUGCGGGGCGGCUUGCACGCCGAGUGCCUGUGACGCGCCGGCUUGACUUAACUGCUUCCCUGAAGUACCGUGAGGUUCCUGAUGUGCGGGCGGUAGACGGUAGGCUUAUGCGGCACGCUUUCGUUUCCACCGUGGCUACUGCGCUUUGGGAAGGCCACGACCUCCUCCUUUGGGGAGGUCCUUAGGAUCUCAGCUUGGCAGUCGAGUGGGUGGCGACCUUUUAAAGGAAUGGGACCCACCCGGAGUUCUUCUUUCUCCUGUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUUUCUCUCUCUCUCUCUGUCUCUCCGUCUCUCUGUGUCUGUCUCUGUCUCUCUGUCUCUCUCUCUCUCUCUCUCUCUCUCUCCUCUCUCUGUCUCUCUCUCUCUUUCCCCCCCCCUCCCCGCCUCUCCCUCGCUCUCUCUUUUGGUUUCCCCCACCCCCUCCCAAGUUCUGGGG
Lig48 RNA GGGAGACGGAAUUCGAGCUCGCCCACUCUUGGAUCGGAAACCCGUCGGCCUCCGAACGGUAAGAGCCUAGCAUGUAGAACUGGUUACCUGCAGCCCAAGCUUGCUGCACGUCUAGGGCGCAGUAGUCCAGGGUUUCCUUGAUGAUGUCAUACUUAUCCUGUCCCUUUUUUUUCCACAGCUCGCGGUUGAGGACAAACUCUUCGCGGUCUUUCCAGUGGGGAUCCGAUAUCCGUACACCAUCAGGGUACGAGCUAGCCCAUGGCGUACACCAUCAGGGUACGACUAGUAGAUCUCGUACACCAUCAGGGUACGGAAUUCUCUAGA

Ligand Structures from this Experiment - 2 

Ligand Structurename PDB ID Chain ID Ligand ID
7A5P200 7A5P 2 Lig27
7A5PY00 7A5P Y Lig48