Lig42

Ligand information

  • Ligand ID: Lig42
  • Ligand Type : RNA
  • Ligand Length : 164
  • Ligand Sequence : AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGACCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG

Available Structures for this Ligand- 4

Ligand Structurename PDB ID Chain ID
3PGWN00 3PGW N
3PGWR00 3PGW R
6QX9100 6QX9 1
7B0Ya00 7B0Y a

Binding Information from Structures

Experiment ID RRM Structure RRM Entryename Experiment Type Ligand ID Contacts
Exp_3PGW 3PGWA01 P09012_RRM1 X-ray Diffraction Lig42 Contacts
Exp_3PGW 3PGWP01 P09012_RRM1 X-ray Diffraction Lig42 Contacts
Exp_6QX9 6QX91A01 P09012_RRM1 EM Lig42 Contacts
Exp_6QX9 6QX91K01 P08621_RRM1 EM Lig42 Contacts
Exp_7B0Y 7B0Yb01 P08621_RRM1 EM Lig42 Contacts
Exp_7B0Y 7B0Yc01 P09012_RRM1 EM Lig42 Contacts

RRM domains tested for Binding - 2 

RRM Entryname Sequence Range RRM Sequence
P08621_RRM1 105 - 175 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL
P09012_RRM1 12 - 83 IYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMR