5YZGF00

Structural information

  • Experiment ID: Exp_5YZG
  • Experiment Type : EM
  • PubMed ID : 29301961
  • Ligand ID: Lig149
  • PDB ID : 5YZG
  • PDB Chain ID : F

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9UNP9 301
Q9Y5S9 174

Ligands involved in this Experiment

Ligand ID Ligand Length Ligand Type
Lig149 107 RNA
Lig182 275 RNA
Lig80 188 RNA

Snapshot of Contacts from this Ligand Structure

PDB ID Amino Acid Chain Amino Acid Position Amino Acid Amino Acid Atom Contact Distance Interaction Type Nucleotide Atom Nucleotide Nucleotide Position Ligand Structurename
5YZG O 35 ARG CZ 3.53 Å ionic OP2 U 23 5YZGF00
5YZG O 35 ARG CZ 3.84 Å van-der-waals O2' A 22 5YZGF00
5YZG O 35 ARG CZ 3.86 Å ionic OP1 U 23 5YZGF00
5YZG O 35 ARG CZ 4.18 Å ionic P U 23 5YZGF00
5YZG O 35 ARG NE 4.84 Å ionic OP2 U 23 5YZGF00

Complete list of contacts