Exp_6FF7

Experiment information

  • Experiment ID: Exp_6FF7
  • PubMed ID : 29361316
  • Experiment Type : EM
  • PDB ID : 6FF7

Protein involved in this Experiment

UniProt ID Protein Length Mutated Instance
P08579 225
Q9NW64 420
Q9UNP9 301
Q9Y388 322
Q9Y3B4 125

RRM domains involved in this Experiment

RRM Entryname Sequence Range RRM Structurename
P08579_RRM1 9 - 80 6FF7X01
P08579_RRM2 153 - 219 6FF7X02
Q9NW64_RRM1 234 - 299 6FF7P01
Q9UNP9_RRM1 8 - 78 6FF7o01
Q9Y388_RRM1 38 - 108 6FF7101
Q9Y3B4_RRM1 21 - 88 6FF7N01, 6FF7z01

Binding Information from Structures

Experiment ID RRM Structure Experiment Type Ligand ID Contacts
Exp_6FF7 6FF7101 EM No contacts
Exp_6FF7 6FF7N01 EM No contacts
Exp_6FF7 6FF7P01 EM No contacts
Exp_6FF7 6FF7X01 EM No contacts
Exp_6FF7 6FF7X02 EM No contacts
Exp_6FF7 6FF7o01 EM No contacts
Exp_6FF7 6FF7z01 EM No contacts

Ligands tested for Binding - 2 

Ligand ID Ligand Type Ligand Sequence
Lig126 RNA GAAUACAAGCUCAUCCGAUAUCCGUACACCAUCAGGGUACGAGCUAGCCCAUGGCGUACACCAUCAGGGUACGACUAGUAGAUCUCGUACACCAUCAGGGUACGGAAUUCUCUAGAGUCGAGGAGGACAUCUCAGCAAAAGAGAAGCUGCUGCGGGCGUCGGAGGACGAGCGGGACCGGGUGCUGGAGGAGCUGCACAAGGCAGAGGACAGCCUGCUGGCUGCCGACGAGACCGCCGCCAAGGUAUGUAUCAAGCUUACAAGACAGCUUCUUAUGUAUUUACUGACCUGUGUUUUUUUGCUACUUUUUUUCUUUUCUCCCCUUCCCCUUUCCCUAUUUUUUUUCUUGCCCUGAUCCGGAAUUUGGAUCC
Lig149 RNA GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUU

Ligand Structures from this Experiment - 2 

Ligand Structurename PDB ID Chain ID Ligand ID
6FF7600 6FF7 6 Lig149
6FF7Z00 6FF7 Z Lig126